Gene detail information of Glyur000031s00004344 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_002510060.1 | 1.67E-10 | conserved hypothetical protein [Ricinus communis] |
| trEMBL | tr|B9R6W7|B9R6W7_RICCO | 6.00E-11 | Putative uncharacterized protein {ECO:0000313|EMBL:EEF52247.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00031 | 43512 | 43742 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 129.440 |
| SRR1783600 | control | 115.843 |
| SRR1783602 | moderate drought stress | 362.916 |
| SRR1811619 | moderate drought stress | 355.113 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 137.662 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 130.323 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 8.276 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 6.169 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 110.985 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 107.542 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.489 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.771 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 45.243 |
| SRR2868004 | Drought Stress (root) | 45.627 |
| SRR2967015 | Control (root) | 43.664 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.951 |
| SRR9715740 | Leaf | 3.743 |
| SRR9715741 | Leaf | 1.889 |
| SRR9715739 | Root | 81.449 |
| SRR9715742 | Root | 63.868 |
| SRR9715743 | Root | 64.915 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.208 |
| SRR8749028 | MeJA induced 9h | 1.885 |
| SRR8749029 | MeJA induced 9h | 2.552 |
| SRR8749030 | Uninduced | 1.099 |
| SRR8749031 | Uninduced | 0.265 |
| SRR8749032 | Uninduced | 4.073 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 46.350 |
| SRR8400027 | Control - Root | 37.274 |