Gene detail information of Glyur000030s00002366 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G47740.1 | 7.00E-53 | Adenine nucleotide alpha hydrolases-like superfamily protein |
| NR | XP_007154064.1 | 4.75E-116 | hypothetical protein PHAVU_003G087900g [Phaseolus vulgaris] |
| Swissprot | tr|Q9SW11|PUB35_ARATH | 3.00E-12 | Serine/threonine-protein kinase |
| trEMBL | tr|V7C9N2|V7C9N2_PHAVU | 2.00E-116 | Uncharacterized protein {ECO:0000313|EMBL:ESW26058.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00030 | 544691 | 546051 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000030s00002366.1 | PF00582.21 | Usp | 75 | 221 | 9.10E-07 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.456 |
| SRR1783600 | control | 0.517 |
| SRR1783602 | moderate drought stress | 0.866 |
| SRR1811619 | moderate drought stress | 0.532 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.110 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.127 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 16.410 |
| SRR2868004 | Drought Stress (root) | 18.681 |
| SRR2967015 | Control (root) | 12.840 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 0.087 |
| SRR9715742 | Root | 0.507 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.163 |
| SRR8749028 | MeJA induced 9h | 0.079 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.643 |
| SRR8749031 | Uninduced | 0.628 |
| SRR8749032 | Uninduced | 0.132 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 14.407 |
| SRR8400027 | Control - Root | 9.549 |