Gene detail information of Glyur000030s00002365 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G47740.1 | 1.00E-34 | Adenine nucleotide alpha hydrolases-like superfamily protein |
| NR | XP_004507583.1 | 1.93E-126 | PREDICTED: uncharacterized protein LOC101493669 [Cicer arietinum] |
| trEMBL | tr|G7ZZT9|G7ZZT9_MEDTR | 8.00E-124 | Universal stress family protein {ECO:0000313|EMBL:KEH32700.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00030 | 536103 | 537645 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000030s00002365.1 | PF00582.21 | Usp | 127 | 245 | 4.10E-06 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.464 |
| SRR1783600 | control | 0.505 |
| SRR1783602 | moderate drought stress | 0.593 |
| SRR1811619 | moderate drought stress | 0.674 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.111 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.109 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.152 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.068 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 23.479 |
| SRR2868004 | Drought Stress (root) | 29.088 |
| SRR2967015 | Control (root) | 33.256 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 11.756 |
| SRR9715740 | Leaf | 4.199 |
| SRR9715741 | Leaf | 21.381 |
| SRR9715739 | Root | 0.722 |
| SRR9715742 | Root | 0.121 |
| SRR9715743 | Root | 0.581 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.058 |
| SRR8749031 | Uninduced | 0.063 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 14.106 |
| SRR8400027 | Control - Root | 7.375 |