Gene detail information of Glyur000030s00002348 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G17150.1 | 1.00E-167 | alpha/beta-Hydrolases superfamily protein |
| NR | XP_004499344.1 | 0 | PREDICTED: uncharacterized protein LOC101489957 isoform X1 [Cicer arietinum] |
| COG | YP_004861705.1 | 2.00E-19 | alpha/beta hydrolase fold protein [Candidatus Chloracidobacterium thermophilum B] |
| trEMBL | tr|A0A072V3H8|A0A072V3H8_MEDTR | 0 | Esterase/lipase domain protein {ECO:0000313|EMBL:KEH32720.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00030 | 393449 | 400773 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000030s00002348.1 | PF12695.2 | Abhydrolase_5 | 78 | 270 | 1.30E-15 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 13.027 |
| SRR1783600 | control | 12.751 |
| SRR1783602 | moderate drought stress | 14.978 |
| SRR1811619 | moderate drought stress | 14.905 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 10.189 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 10.479 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 9.899 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 10.528 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 10.215 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 10.731 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 9.425 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 9.673 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 35.695 |
| SRR2868004 | Drought Stress (root) | 35.372 |
| SRR2967015 | Control (root) | 35.302 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 12.739 |
| SRR9715740 | Leaf | 9.905 |
| SRR9715741 | Leaf | 11.858 |
| SRR9715739 | Root | 3.414 |
| SRR9715742 | Root | 12.059 |
| SRR9715743 | Root | 11.639 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 14.328 |
| SRR8749028 | MeJA induced 9h | 12.513 |
| SRR8749029 | MeJA induced 9h | 11.082 |
| SRR8749030 | Uninduced | 5.433 |
| SRR8749031 | Uninduced | 2.529 |
| SRR8749032 | Uninduced | 3.413 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 53.248 |
| SRR8400027 | Control - Root | 46.092 |