Gene detail information of Glyur000030s00002322.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G14440.2 | 9.00E-55 | homeobox protein 31 |
| NR | XP_007154109.1 | 1.74E-124 | hypothetical protein PHAVU_003G091100g [Phaseolus vulgaris] |
| Swissprot | tr|O64722|ZHD3_ARATH | 1.00E-76 | Zinc-finger homeodomain protein 3 |
| trEMBL | tr|V7C9S3|V7C9S3_PHAVU | 6.00E-125 | Uncharacterized protein {ECO:0000313|EMBL:ESW26103.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00030 | 191491 | 192411 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | zf-HD |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000030s00002322.1 | PF04770.7 | ZF-HD_dimer | 87 | 142 | 4.50E-29 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.360 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.238 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.994 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.438 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.073 |
| SRR2868004 | Drought Stress (root) | 0.054 |
| SRR2967015 | Control (root) | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 10.134 |
| SRR9715740 | Leaf | 6.902 |
| SRR9715741 | Leaf | 4.771 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 1.385 |
| SRR9715743 | Root | 0.491 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.159 |
| SRR8749029 | MeJA induced 9h | 0.066 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.065 |
| SRR8400027 | Control - Root | 0.176 |