Gene detail information of Glyur000030s00002285 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G43945.1 | 9.00E-71 | |
| NR | XP_004499380.1 | 1.33E-134 | PREDICTED: uncharacterized protein LOC101501502 [Cicer arietinum] |
| COG | YP_001518791.1 | 6.00E-34 | hypothetical protein AM1_4497 [Acaryochloris marina MBIC11017] |
| trEMBL | tr|I3T1K7|I3T1K7_LOTJA | 4.00E-122 | Uncharacterized protein {ECO:0000313|EMBL:AFK46399.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00030 | 5707 | 10231 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 31.127 |
| SRR1783600 | control | 32.155 |
| SRR1783602 | moderate drought stress | 22.260 |
| SRR1811619 | moderate drought stress | 22.789 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 31.810 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 31.523 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 37.162 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 35.795 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 18.752 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 18.790 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 62.640 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 62.886 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 30.422 |
| SRR2868004 | Drought Stress (root) | 30.592 |
| SRR2967015 | Control (root) | 29.450 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 38.079 |
| SRR9715740 | Leaf | 47.751 |
| SRR9715741 | Leaf | 41.156 |
| SRR9715739 | Root | 9.957 |
| SRR9715742 | Root | 10.668 |
| SRR9715743 | Root | 11.132 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 15.887 |
| SRR8749028 | MeJA induced 9h | 13.405 |
| SRR8749029 | MeJA induced 9h | 14.576 |
| SRR8749030 | Uninduced | 9.221 |
| SRR8749031 | Uninduced | 4.354 |
| SRR8749032 | Uninduced | 5.693 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 62.385 |
| SRR8400027 | Control - Root | 53.923 |