Gene detail

Gene detail information of Glyur000029s00003675

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT2G42880.1	0	MAP kinase 20
NR	XP_003551917.1	0	PREDICTED: mitogen-activated protein kinase 10-like [Glycine max]
COG	YP_002560205.1	5.00E-25	hypothetical protein MCCL_0802 [Macrococcus caseolyticus JCSC5402]
Swissprot	tr\|Q5ZCI1\|MPK10_ORYSJ	0	Mitogen-activated protein kinase 10
trEMBL	tr\|I1N0W7\|I1N0W7_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA18G12720.1}

Sequence

Transcript Sequence

>Glyur000029s00003675.1
AATTTTTTCACGTATCTCTCTCTCTCTCTCCCTCTCTTCCTTCCCCTGTGTCGGTGTACTCAGATCTTGTGCACTCCACGCTCTTCATCGCTGCCACTCTTTTCCATTTCTCTTCTCATTTGGCATTTTAAGTTGTTACAAATCGTGGGTGTCTCGTGGTTTTTCTGTTGAAGCTAGCTAAAGGGGTGTTTCTTCTGAGAGCTTGGATCTTTGGTGGGATAGTGAAAATGAGGGTGCTTTGTTCACTGGGTTGGAGCAGGGTCACTATATGATTGTGGATGGTGGTGGTGGCTGCTACTAGTATTTGTGCGGTTTGGTGATTCTGTTGTTTGGATTGGAAGGGAAGGTGCATGTGGGATCTCATTTGGGTTCATTGTTTGGTGAAGGATTTGGCCAAGGGGAGGATAAGCTGGGATTGTTGTGCGTTTGTGATAATGAGTAGGGGTAGGTGGGGCAAATGTGGCTGAGTTAAAGGTGTTAAAGTTTTGTCTCCTTTTTGTTTTTGTTGTTGGAAAAAGGAAATTTTGAGACCTGGGGTTTGTTCAGTTTGTGCTTGATCTTCACCACCCCATAGGGATTTGTTGGAGAATTTGTGGGTGTCANCATAAAATGCAGCAAGATCACAGGAAAAAGATAGATGGCATTCCTGTTTTAAAACGCTTTCAGAGTTCAGTAGAGATGGATTTTTTCTCTGAATATGGTGATGCCAACCGGTACAAAATCCAAGAAGTCATTGGNAAAGGAAGTTATGGCGTTGTCTGTTCAGCCATGGACACTCATACCGGTGAAAAAGTGGCAATTAAGAAGATTCATGACATCTTTGAGCATATATCTGATGCTGCACGTATTCTCCGTGAGATAAAGCTGCTTAGACTTCTACGACATCCTGATATTGTTGAAATAAAACACATTATGCTGCCTCCTTCTAGGAAGGACTTCAAAGATATATATGTTGTTTTTGAGCTCATGGAGTCTGATCTTCATCAAGTGATTAAAGCCAATGATGACTTAACGAAAGAGCATTATCAGTTCTTTCTTTATCAATTACTTCGAGCACTGAAGTATATTCACACCGCAAATGTCTATCATCGAGATTTGAAGCCAAAAAATATACTGGCAAATGCAAACTGTAAACTTAAAATATGTGATTTTGGACTAGCTAGAGTTGCCTTCAGCGACACACCGACAACTATATTTTGGACGGATTATGTTGCTACAAGATGGTATAGAGCTCCAGAGTTATGTGGATCATTTTACTCAAAGTATACACCAGCGATTGATATATGGAGTATAGGTTGCATCTTTGCCGAAGTACTAACAGGAAAGCCACTTTTTCCTGGAAAAAATGTAGTCCATCAATTGGATCTGATGACAGATCTGCTNGGGACTCCCTCGCTGGATACTATATCACGGGTGCGCAATGAGAAGGCAAGGAGATACCTAACTAGCATGAGAAAAAAGCAGCCTGTGTCATTTGCACAAAAATTTCCCAATGCAGACCCTTTAGCACTGCGACTATTGGAAAAGTTACTGGCTTTTGACCCGAAAGACCGGCCTACTGCTGAAGAGGCACTGGCCGATCCTTACTTCAAGGGACTGGCAAAAGTGGAGAGGGAACCATCCTGCCAGCCTATAACAAAAATGGAGTTTGAATTTGAAAGACGAAGAGTGACAAAGGAAGAAATTCGAGAGCTAATTTTCCGTGAGATTCTAGAGTATCATCCTCAACTATTGAAAGACTACATGAATGGAACAGAGAGAACTAATTTTCTTTATCCAAGTGCCGTTGATCAATTCAGAAAGCAGTTTGCTCATCTAGAGGAAAATGGTAAAAATGGTCCTGTTATGCCACTGGATCGAAAGCATGTTTCTCTTCCAAGGTCAACAATTGTACATTCAAATACGGTACACCAAAAAGAGCAAACAAATATCGCTTCCAGCAAAATCCGGCAAACAACCGAAGAATATAATAAGAATTTCAGAGATACCGAAATTCCAGCACCAAGGTCAATGCAGGGACCACAAAGAATTCCGCTAGCGAAACCAGGTAAAGTTGTTGGGCCAGTTGTTCCATATGAGTATGGGAGTGTTGTAAAGGATTCTTATGATCCAAGGGCATTTATCAGAGGTTCTGTGCTTCCTGCTCAACCTGTTCCCCAAGCATATTATTATCAAAGGCCTACTAGCACTGGAAATCAAGAAAGGCCAGCAGCAACAGAAGCTGACAAGGGGGGTGTGCCTTTGCAAGCAAAACATGCACAGCAATGTGGGGTCAACGCCAAAATAGCACCGGAAATAGCTATCAATATTGACACAAACCCGTTTTTTATGACAAGGGCAGGAGTGAACAAGTTAGAAAAGGATGACCAAATTGCCATAGAAACAAACTTGCTGCAATCAAAGGCTCAATATGGTGGAATTGGTGCTGCAGCTGGGGCTACTGCACATAGAAAAGTTGGTCCTATTCAGTATGGTATGGCAAGGATGTTCTAGTAGAGGGGTGTACTGTCTTGTGAATATTTTGGCCAGGGGGAGCAATCACTGTAGAGAAAAAGGGCCCTTTTGCAGGGGAAGGAGCTGTAATCTCTCTCTGGTCATGGTTTGTACAAAATGAGGGAAGAGGGTGTGGACCATTGAGGCAGNAAGTACTTCCCTTGTGAAAAGGCCCCCAACTTTCTCTGGTCAAAAAGCTATGAACTTTGGTTATTAACAAACTATCAAGAAACTGTAACATTGAAATTGAGTCCTATCTTTTAAGTCAAATCCATGACCTTGGTGTTTGCAATGGAATCACCACCACCTTGAAACCAATCTCTTGTATGT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00029	542425	548668	-

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:4.5.1

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function

GO:0004672 protein kinase activity

GO:0004707 MAP kinase activity

GO:0005524 ATP binding

GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000029s00003675.1	PF00069.20	Pkinase	36	327	1.50E-68
Glyur000029s00003675.2	PF00069.20	Pkinase	27	318	1.40E-68

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	14.507
SRR1783600	control	14.267
SRR1783602	moderate drought stress	10.133
SRR1811619	moderate drought stress	10.098

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	12.083
DRR006520	Root Summer glycyrrhizin high producing strain	12.346
DRR006521	Root Winter glycyrrhizin high producing strain	8.784
DRR006522	Root Winter glycyrrhizin high producing strain	8.238
DRR006523	Root Summer glycyrrhizin low producing strain	7.463
DRR006524	Root Summer glycyrrhizin low producing strain	6.374
DRR006525	Leaf Summer glycyrrhizin high producing strain	30.427
DRR006526	Leaf Summer glycyrrhizin high producing strain	30.407

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	52.252
SRR2868004	Drought Stress (root)	48.409
SRR2967015	Control (root)	40.673

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	20.872
SRR9715740	Leaf	24.305
SRR9715741	Leaf	17.819
SRR9715739	Root	1.515
SRR9715742	Root	14.620
SRR9715743	Root	13.294

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	21.826
SRR8749028	MeJA induced 9h	24.426
SRR8749029	MeJA induced 9h	17.628
SRR8749030	Uninduced	10.345
SRR8749031	Uninduced	5.029
SRR8749032	Uninduced	7.316

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	56.982
SRR8400027	Control - Root	54.068