Gene detail information of Glyur000029s00003639 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G06470.2 | 2.00E-24 | Nucleotide/sugar transporter family protein |
| NR | XP_004510358.1 | 1.13E-56 | PREDICTED: probable sugar phosphate/phosphate translocator At1g06470-like [Cicer arietinum] |
| Swissprot | tr|Q8H184|PT106_ARATH | 3.00E-40 | Probable sugar phosphate/phosphate translocator At1g06470 |
| trEMBL | tr|A0A072TNB7|A0A072TNB7_MEDTR | 1.00E-54 | Triose-phosphate transporter family protein {ECO:0000313|EMBL:KEH18328.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00029 | 324208 | 331523 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000029s00003639.1 | PF03151.11 | TPT | 1 | 83 | 3.40E-14 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 12.503 |
| SRR1783600 | control | 12.779 |
| SRR1783602 | moderate drought stress | 9.839 |
| SRR1811619 | moderate drought stress | 9.706 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 19.796 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 18.954 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 34.002 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 31.828 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 14.303 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 14.100 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 10.189 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 10.033 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 42.392 |
| SRR2868004 | Drought Stress (root) | 40.421 |
| SRR2967015 | Control (root) | 42.873 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 15.749 |
| SRR9715740 | Leaf | 16.596 |
| SRR9715741 | Leaf | 19.686 |
| SRR9715739 | Root | 7.434 |
| SRR9715742 | Root | 18.187 |
| SRR9715743 | Root | 16.853 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 13.542 |
| SRR8749028 | MeJA induced 9h | 23.697 |
| SRR8749029 | MeJA induced 9h | 8.181 |
| SRR8749030 | Uninduced | 14.680 |
| SRR8749031 | Uninduced | 9.222 |
| SRR8749032 | Uninduced | 7.329 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 44.891 |
| SRR8400027 | Control - Root | 44.511 |