Gene detail information of Glyur000029s00003630 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G54850.1 | 2.00E-18 | |
| NR | XP_006602224.1 | 3.21E-57 | PREDICTED: uncharacterized protein LOC100777222 isoform X1 [Glycine max] |
| trEMBL | tr|I1N0S7|I1N0S7_SOYBN | 1.00E-57 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G11960.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00029 | 288570 | 290102 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.316 |
| SRR1783600 | control | 3.872 |
| SRR1783602 | moderate drought stress | 1.557 |
| SRR1811619 | moderate drought stress | 1.994 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.816 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.222 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.360 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.699 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.788 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.679 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.935 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.513 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.973 |
| SRR2868004 | Drought Stress (root) | 2.007 |
| SRR2967015 | Control (root) | 2.247 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.435 |
| SRR9715740 | Leaf | 3.815 |
| SRR9715741 | Leaf | 3.285 |
| SRR9715739 | Root | 2.630 |
| SRR9715742 | Root | 1.331 |
| SRR9715743 | Root | 1.603 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.290 |
| SRR8749028 | MeJA induced 9h | 1.051 |
| SRR8749029 | MeJA induced 9h | 0.507 |
| SRR8749030 | Uninduced | 2.513 |
| SRR8749031 | Uninduced | 1.204 |
| SRR8749032 | Uninduced | 1.383 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 7.771 |
| SRR8400027 | Control - Root | 5.222 |