Gene detail information of Glyur000029s00003618 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G54855.1 | 4.00E-56 | Pollen Ole e 1 allergen and extensin family protein |
| NR | AFK43103.1 | 9.00E-96 | unknown [Lotus japonicus] |
| trEMBL | tr|I3SS61|I3SS61_LOTJA | 3.00E-96 | Uncharacterized protein {ECO:0000313|EMBL:AFK43103.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00029 | 203477 | 206793 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000029s00003618.1 | PF01190.12 | Pollen_Ole_e_I | 29 | 110 | 3.40E-13 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 28.300 |
| SRR1783600 | control | 29.745 |
| SRR1783602 | moderate drought stress | 54.704 |
| SRR1811619 | moderate drought stress | 54.991 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 84.610 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 86.247 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 124.651 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 119.629 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 82.769 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 84.567 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 22.116 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 22.960 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 58.826 |
| SRR2868004 | Drought Stress (root) | 67.283 |
| SRR2967015 | Control (root) | 72.946 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 31.510 |
| SRR9715740 | Leaf | 28.052 |
| SRR9715741 | Leaf | 33.844 |
| SRR9715739 | Root | 41.783 |
| SRR9715742 | Root | 43.383 |
| SRR9715743 | Root | 43.300 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 32.002 |
| SRR8749028 | MeJA induced 9h | 33.649 |
| SRR8749029 | MeJA induced 9h | 31.496 |
| SRR8749030 | Uninduced | 22.899 |
| SRR8749031 | Uninduced | 10.552 |
| SRR8749032 | Uninduced | 23.102 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 65.653 |
| SRR8400027 | Control - Root | 68.466 |