Gene detail information of Glyur000029s00003588 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_003530710.1 | 6.11E-07 | PREDICTED: DEAD-box ATP-dependent RNA helicase 53-like [Glycine max] |
| trEMBL | tr|I1KXV6|I1KXV6_SOYBN | 2.00E-07 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G41510.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00029 | 50666 | 53693 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.522 |
| SRR1783600 | control | 2.464 |
| SRR1783602 | moderate drought stress | 2.374 |
| SRR1811619 | moderate drought stress | 2.018 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.445 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.409 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.187 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.902 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.170 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.025 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.018 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.870 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.892 |
| SRR2868004 | Drought Stress (root) | 1.706 |
| SRR2967015 | Control (root) | 1.538 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.029 |
| SRR9715740 | Leaf | 2.573 |
| SRR9715741 | Leaf | 2.540 |
| SRR9715739 | Root | 0.701 |
| SRR9715742 | Root | 0.579 |
| SRR9715743 | Root | 1.053 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.666 |
| SRR8749028 | MeJA induced 9h | 1.999 |
| SRR8749029 | MeJA induced 9h | 1.327 |
| SRR8749030 | Uninduced | 0.934 |
| SRR8749031 | Uninduced | 0.106 |
| SRR8749032 | Uninduced | 0.863 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.407 |
| SRR8400027 | Control - Root | 3.965 |