Gene detail information of Glyur000029s00003577 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_003553076.1 | 4.48E-17 | PREDICTED: uncharacterized protein LOC100793896 [Glycine max] |
| trEMBL | tr|K7MQV5|K7MQV5_SOYBN | 2.00E-17 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G10891.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00029 | 3729 | 4649 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 14.759 |
| SRR1783600 | control | 14.767 |
| SRR1783602 | moderate drought stress | 16.247 |
| SRR1811619 | moderate drought stress | 16.437 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 11.509 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 12.242 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 12.211 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 12.056 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 19.419 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 17.607 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 10.681 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 11.590 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 23.308 |
| SRR2868004 | Drought Stress (root) | 28.700 |
| SRR2967015 | Control (root) | 29.322 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 6.848 |
| SRR9715740 | Leaf | 6.138 |
| SRR9715741 | Leaf | 9.972 |
| SRR9715739 | Root | 4.766 |
| SRR9715742 | Root | 21.141 |
| SRR9715743 | Root | 16.940 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 9.856 |
| SRR8749028 | MeJA induced 9h | 49.998 |
| SRR8749029 | MeJA induced 9h | 5.355 |
| SRR8749030 | Uninduced | 9.268 |
| SRR8749031 | Uninduced | 6.150 |
| SRR8749032 | Uninduced | 2.915 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 41.954 |
| SRR8400027 | Control - Root | 36.575 |