Gene detail information of Glyur000028s00003569 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G24160.1 | 2.00E-32 | alpha/beta-Hydrolases superfamily protein |
| NR | XP_003523638.1 | 2.08E-48 | PREDICTED: abhydrolase domain-containing protein 4-like isoform X1 [Glycine max] |
| Swissprot | tr|Q0J0A4|LPAAT_ORYSJ | 1.00E-41 | Probable 1-acylglycerol-3-phosphate O-acyltransferase |
| trEMBL | tr|I1JT54|I1JT54_SOYBN | 8.00E-49 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA04G02900.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00028 | 501364 | 504480 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000028s00003569.1 | PF12697.2 | Abhydrolase_6 | 6 | 59 | 1.40E-05 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.989 |
| SRR1783600 | control | 2.445 |
| SRR1783602 | moderate drought stress | 2.503 |
| SRR1811619 | moderate drought stress | 2.320 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.303 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 9.005 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 25.949 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 24.015 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 10.140 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 10.487 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 11.187 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 9.711 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 20.092 |
| SRR2868004 | Drought Stress (root) | 39.829 |
| SRR2967015 | Control (root) | 19.530 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 15.248 |
| SRR9715740 | Leaf | 13.210 |
| SRR9715741 | Leaf | 19.857 |
| SRR9715739 | Root | 2.136 |
| SRR9715742 | Root | 4.275 |
| SRR9715743 | Root | 3.755 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 16.303 |
| SRR8749028 | MeJA induced 9h | 26.249 |
| SRR8749029 | MeJA induced 9h | 43.864 |
| SRR8749030 | Uninduced | 77.376 |
| SRR8749031 | Uninduced | 99.888 |
| SRR8749032 | Uninduced | 97.386 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 11.877 |
| SRR8400027 | Control - Root | 12.081 |