Gene detail information of Glyur000028s00003559 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G54350.3 | 2.00E-69 | Forkhead-associated (FHA) domain-containing protein |
| NR | XP_003523558.1 | 0 | PREDICTED: uncharacterized protein LOC100786493 [Glycine max] |
| trEMBL | tr|K7KHS6|K7KHS6_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA04G02970.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00028 | 446727 | 451787 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000028s00003559.1 | PF13325.1 | MCRS_N | 8 | 58 | 7.10E-08 |
| Glyur000028s00003559.1 | PF00498.21 | FHA | 732 | 803 | 1.60E-08 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.904 |
| SRR1783600 | control | 2.867 |
| SRR1783602 | moderate drought stress | 2.263 |
| SRR1811619 | moderate drought stress | 2.201 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.178 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.040 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.124 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.096 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.061 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.980 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.862 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.834 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.985 |
| SRR2868004 | Drought Stress (root) | 2.048 |
| SRR2967015 | Control (root) | 1.665 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.607 |
| SRR9715740 | Leaf | 1.062 |
| SRR9715741 | Leaf | 0.330 |
| SRR9715739 | Root | 0.689 |
| SRR9715742 | Root | 2.394 |
| SRR9715743 | Root | 2.004 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 8.773 |
| SRR8749028 | MeJA induced 9h | 6.263 |
| SRR8749029 | MeJA induced 9h | 4.966 |
| SRR8749030 | Uninduced | 1.536 |
| SRR8749031 | Uninduced | 0.974 |
| SRR8749032 | Uninduced | 1.082 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.822 |
| SRR8400027 | Control - Root | 2.539 |