Gene detail information of Glyur000028s00003557 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G62262.1 | 4.00E-05 | SLAC1 homologue 4 |
| NR | XP_010672350.1 | 4.31E-20 | PREDICTED: S-type anion channel SLAH1-like isoform X2 [Beta vulgaris subsp. vulgaris] |
| Swissprot | tr|A8MRV9|SLAH4_ARATH | 5.00E-21 | S-type anion channel SLAH4 |
| trEMBL | tr|V4KH74|V4KH74_EUTSA | 3.00E-19 | Uncharacterized protein {ECO:0000313|EMBL:ESQ29197.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00028 | 431481 | 432583 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 7.248 |
| SRR1783600 | control | 6.674 |
| SRR1783602 | moderate drought stress | 3.559 |
| SRR1811619 | moderate drought stress | 3.792 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 14.367 |
| SRR2868004 | Drought Stress (root) | 1.860 |
| SRR2967015 | Control (root) | 1.824 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.062 |
| SRR9715739 | Root | 2.421 |
| SRR9715742 | Root | 0.682 |
| SRR9715743 | Root | 0.360 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 9.106 |
| SRR8749028 | MeJA induced 9h | 19.175 |
| SRR8749029 | MeJA induced 9h | 13.723 |
| SRR8749030 | Uninduced | 78.840 |
| SRR8749031 | Uninduced | 186.540 |
| SRR8749032 | Uninduced | 162.597 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 8.163 |
| SRR8400027 | Control - Root | 3.686 |