Gene detail

Gene detail information of Glyur000028s00003537.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT2G16400.1	1.00E-87	BEL1-like homeodomain 7
NR	XP_003527678.1	0	PREDICTED: BEL1-like homeodomain protein 3-like isoform X1 [Glycine max]
Swissprot	tr\|Q9FXG8\|BLH10_ARATH	5.00E-111	BEL1-like homeodomain protein 10
trEMBL	tr\|I1K7P2\|I1K7P2_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA06G03200.1}

Sequence

Transcript Sequence

>Glyur000028s00003537.1
ACCGTTCTTCCAATGATAAGGAGGTCGGTCTTTTGTTTTTTTGAAATGAAATATATCTCTTGGGATTACCATTTGTCTGGGCTTCTCCAAACCCATTTTGTGGATTATTGTCTCTAAAGTCTAACCCCACCCCTCTGCTACTGCTTGCTTCTGACTTTCAGCTCGGAATAGCAGAGGAAATGTTACATCTTGTGCTCATCACCGCCAATTGTTTCAGCTGATTTCATTGTGAAGAGACCGGAAATCAGATTCTTATTTCCAACAAGTGCTGATCTTATAATGTATACCGACCAAGTCTTCTCTTCAGGGTCCTATGGAGAGATGTTCACAGGGAATCCTTTGTTACCTCATAACTACAGTGAATCTGTAGGAGGAGGACAAAATGAGGCCAAGTTTATCACAGCTATGGGTGACACAGTGACTATGCAGTCCATTGGTGATTCACCTTGCAACTCTCATGCTGTTCCAAGGACACAGATGGGGATGGTAGATGGTGACCAAAACATGCAGTGCCAGGGCTTATCTCTGAGTCTAGGGACAATGTTGCCTTCTAATGCATCTGTCCCTCCGTTTCAATACCAATATCCTGACACTGGTCTCATGTCTTTAATGACTTCTTGTCTTCCAAATTTAAAGGGAAATANTAATACTTTATCTAAGGATGATGAGGCCAACCTACATAAGGAGTTGAGAAGTGCTGAATGCATGGCATCATCTATATCTTCTGGGGGCTTTCATGACATTACCAAAAGGGAGGGGTTTTGCAACCCACACCCTTCAATCTGTCTTAGAAATGCTCATTCTGATCCATGCCTGCAGGGATCACCAGGTTTTTCAAACATTGTCTTAAACTCCCAATACCTTAAGGCGGCACAGGAGTTACTTGATGAAATAGTTAGTGTCCGAAAGGCTTTGAGGCAACCTGCAATGGAGAAACAAGAAAAACCCCGTGACATTGGATTAGATAGCTCCAAAGATGCTGATGGAAAATCTACCAGTCAATCTATGCAAATATCTTCAGGCCCTAGTAATGGTTCTAACTCCAATCCTTCTTGTGAACTATCACCAGTAGAACGGCAGAATTTGTTGGATAAGAAGACAAAGCTTTTGTCGATGTTGGATGAGGTAGATAAAAGATACAGACAGTACTGCCATCAGATGCAGATTGTGGTGTCATCTTTCGATATGGTTGCTGGGTGTGGAGCAGCAGAACCATACACTACACTTGCGTTGCGAACAATTTCTCGCCACTTTCGCAGTTTGCGTGATGCTATCAGTGGCCAAATTCAAGTGACTCAAAGGAGCCTTGGGGAACAAGAGGGAATACCCCGTCTCCGCTATGTGGATCAGCAACTCAGACAACAAAAGGCCCTTCAGCAGCTTGGTGTAATGCGACAAGCTTGGAGGCCTCAGAGAGGACTTCCTGAAAGCTCTGTTTCAATCCTTCGTGCTTGGCTCTTTGAGCATTTTCTTCATCCTTACCCCAAGGATTCAGAGAAAATCATGCTAGCCAGACAAACTGGCTTGACCCGGAATCAGGTGGCGAATTGGTTCATCAATGCACGGGTGCGTCTTTGGAAACCAATGATTGAGGAGATGTACAAAGAAGAGTTTGGTGGTTCCCAGATGAACTGCAATCTTTCATCTGAAAATACTCTCAAAGGTAAAAGAGATGATGTTCAAGAGTTTGATAATGATAAATCGGAGGAGTCACAGGACAATCTAATAGCTGCTGCTGATAGTGTCCAACCGGGGCAACAAGCCTCCTCCACTACAGAACTGGACAGTGGAGGAAAAAACGTGATGGATTCTGGGTCCAGGAAATTGCAGCAGGGTAACCAAAGGTTCAGCATGAACAACAATAGCCTTTATTCGAGTGGTGGTGGCACCCAAATGGCTTCTACCCCTGCCACGTATGATTTATCAGAGTTGGGTAACTTTACTGTGGGTNGCCACGTCTCTCTTGCATTGGAGTTGAGGAACTGTGAAAGCGATGGATTTGCCATGTCCGATGATGCCACCCACAAAAGACATAATCAGACATTGGCTTCTTCCTCAGCAGAGACTGATTTACTAGATTACCATTTCACAGACTCAGGAAAGCAACAACACAGGTTTGGCAATCCCCATCTGCTGCATGAGTTTGTCGTATGAAATCTGGCAAAGATATTTGATGTTTTTATGGGATCTGTGGAAAGGTGTACCCGCAACAAAGCAGAAAAGAGAAAGCCTATGCGCCTCTTTTCTAATTCATTCCCGTTTCCCATTTGTTCATAAAGTGATGTAAATCACAAACCGTACAAAAAATATACGGGTAGGCATATGTGTAGATATTCATTTGCTTGTAATATTACAGATCGTGATTGGTTGGCTGTATCATGTATGTGCAGGCAATTTTTGTAAGGATAGAAAAACACAGCTCGTGCATTTATGTTCAATAAGAAATCTTGTTAAGAAAAAAACATAACAAGTACGATGT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00028	301900	306269	-

Gene family

Gene family	subfamily
Transcription Factors Family	HB
EAR motif-containing Proteins	HB

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006355 regulation of transcription, DNA-templated

molecular_function
GO:0003677 DNA binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000028s00003537.1	PF07526.6	POX	188	333	1.80E-49
Glyur000028s00003537.1	PF05920.6	Homeobox_KN	392	431	5.90E-16

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	17.840
SRR1783600	control	17.963
SRR1783602	moderate drought stress	24.647
SRR1811619	moderate drought stress	24.163

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	9.289
DRR006520	Root Summer glycyrrhizin high producing strain	8.958
DRR006521	Root Winter glycyrrhizin high producing strain	23.193
DRR006522	Root Winter glycyrrhizin high producing strain	22.529
DRR006523	Root Summer glycyrrhizin low producing strain	22.461
DRR006524	Root Summer glycyrrhizin low producing strain	22.549
DRR006525	Leaf Summer glycyrrhizin high producing strain	27.892
DRR006526	Leaf Summer glycyrrhizin high producing strain	27.971

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	35.455
SRR2868004	Drought Stress (root)	37.013
SRR2967015	Control (root)	42.084

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	23.988
SRR9715740	Leaf	29.250
SRR9715741	Leaf	30.548
SRR9715739	Root	7.521
SRR9715742	Root	18.977
SRR9715743	Root	15.544

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	10.784
SRR8749028	MeJA induced 9h	13.232
SRR8749029	MeJA induced 9h	7.174
SRR8749030	Uninduced	12.924
SRR8749031	Uninduced	14.274
SRR8749032	Uninduced	12.881

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	25.105
SRR8400027	Control - Root	22.796