Gene detail information of Glyur000028s00003535.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G75420.1 | 0 | UDP-Glycosyltransferase superfamily protein |
| NR | XP_007136633.1 | 0 | hypothetical protein PHAVU_009G060600g [Phaseolus vulgaris] |
| COG | YP_002425791.1 | 2.00E-14 | glycoside hydrolase [Acidithiobacillus ferrooxidans ATCC 23270] |
| trEMBL | tr|V7ASI7|V7ASI7_PHAVU | 0 | Uncharacterized protein {ECO:0000313|EMBL:ESW08627.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00028 | 290281 | 294406 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GT4 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000028s00003535.1 | PF00534.15 | Glycos_transf_1 | 259 | 439 | 3.80E-20 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 17.875 |
| SRR1783600 | control | 18.009 |
| SRR1783602 | moderate drought stress | 20.154 |
| SRR1811619 | moderate drought stress | 19.915 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 33.616 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 33.505 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 24.935 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 24.086 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 36.319 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 36.562 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 14.432 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 14.418 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 38.204 |
| SRR2868004 | Drought Stress (root) | 37.388 |
| SRR2967015 | Control (root) | 39.432 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 13.616 |
| SRR9715740 | Leaf | 15.993 |
| SRR9715741 | Leaf | 14.641 |
| SRR9715739 | Root | 7.105 |
| SRR9715742 | Root | 17.148 |
| SRR9715743 | Root | 14.451 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 36.291 |
| SRR8749028 | MeJA induced 9h | 22.154 |
| SRR8749029 | MeJA induced 9h | 19.747 |
| SRR8749030 | Uninduced | 17.872 |
| SRR8749031 | Uninduced | 9.695 |
| SRR8749032 | Uninduced | 9.214 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 33.771 |
| SRR8400027 | Control - Root | 36.754 |