Gene detail

Gene detail information of Glyur000028s00003528.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G10210.2	2.00E-173	mitogen-activated protein kinase 1
NR	NP_001241004.1	0	uncharacterized protein LOC100798863 [Glycine max]
COG	YP_003112167.1	5.00E-23	serine/threonine protein kinase [Catenulispora acidiphila DSM 44928]
Swissprot	tr\|Q40517\|NTF3_TOBAC	0	Mitogen-activated protein kinase homolog NTF3
trEMBL	tr\|C6TAM5\|C6TAM5_SOYBN	0	Mitogen-activated protein kinase {ECO:0000256\|RuleBase:RU361165}

Sequence

Transcript Sequence

>Glyur000028s00003528.1
AATTATTTAAAAAAAATATGGTGTAGCCAAAAACGAGTATCACGAAAAAGGATGATGGAAGATACAAACAGAAAAGAAAAGAAAAAGAAAATATAGACGAGGCTAGGTGCGAGTATTGGAGCAAAACGCGGGTGTGACTTCGTTGTGTTGCGTTGAGAGGGAGAGAGAGAGAGAGAGAGAGAGATGCATATCCATTGAGAAAGTCCAAATATCCGAGGCTTCCTGGTCTGGTCGCGACGACACAAGGAATCTTAGATCGCTGAAAAAACCTATGCAGCCCCGAGCAGATCAAACACAACACGACGGGGTATTCAAATTTCTAAGTTAAATTCCTGGCTTTCCACTCAACTCCACTGAGGATGAATTCAGCCTTTCCCTGAATAAAATTTCTGGGTGTTACGTGTTTATTTATTTGCCTATGAAATCAGATTCTTCCACTGAACTTGCACAGCTTCAAGGATAAGAGTTTTGTTTTTCCACATAAAGGGAATGGCGACTCCTGTTGAGCCCCCAAATGGGATCAGAACTGAGGGGAAGCATTATTATTCAATGTGGCAAACCCTGTTTGAGATTGACACAAAATATGTGCCCATCAAGCCTATTGGTCGAGGAGCATATGGAATTGTATGCTCTTCTGTGAACAGAGAAACAAACGAGAAGGTTGCGATCAAGAAGATACAAAATGCCTTTGAGAATCGCGTTGATGCACTCAGGACTTTGCGTGAACTGAAACTTCTTCGTCACCTTCACCATGAGAACGTGATTGCCTTGAAAGACATCATGATGCCCGTTCATAGGAGTAGTTTCAAGGATGTCTATCTGGTTTATGAACTCATGGACACGGATTTGCATCAGATTATTAAGTCTTCTCAAGCATTGTCTAANGATCACTGCCAATATTTCCTCTTTCAGTTGCTTCGGGGCTTGAAATATCTTCACTCAGCTAACATCCTTCATCGTGACTTGAAACCTGGGAATCTTCTAATTAATGCAAACTGTGACCTTAAAATATGTGACTTTGGGTTAGCACGCACTAACTGCAGCAAGAACCAGTTCATGACCGAGTATGTTGTCACTCGGTGGTATAGGGCACCTGAGCTCCTACTTTGCTGTGACAACTATGGGACATCTATTGATGTATGGTCAGTGGGATGCATCTTTGCAGAGCTCCTTGGACGAAAACCTATCTTCCCCGGTTCAGAGTGTCTCAACCAGCTAAAACTGATTATCAATATCCTTGGTAGTCAAAGGGAGGAGGATATTGAATTCATTGATAATCCAAAGGCAAAGAAGTATATCAAGTCACTTCCATATTCTCCTGGAACCCCCTTTTCCCGGCTTTACCCCAATGCGCATCCATTGGCAATTGATCTACTGGCAAAGATGCTTGTTTTTGATCCAACAAAGAGGATTAGTGTCACGGAAGCGCTTCAACACCCTTACATGGCCTCTCTCTATGATCCTAATTCTGACCCTCCGGCCATCATTCCTATTGATCTTGACATTGATGAGGATCTAGGGGAAGAGATGATAAGGGAGATGATGTGGAAGGAAATGCTTCATTACCATCCTGAATCTGCTATGGAAAATGCAGAGTTATGCTCCTGATCTTATTCTCTTCGTTTTCTTGGTTATGTTCTCTTTGTTGGTGCCAATGGAGTCTGATATCATAGCTTGCTTTAAATAACTAGGAGGGCTCTGTCATCAGTGAGCTCAATATATGTTCTGTTTCCTCTTTGTTGAGAGAGAGCAGAGAAGAAAACAGCAAAAGTGGTCATCTTTAAAAAAAGAAAAAAACATGCATACTGTGTTTTTCTGATGATGCATGATAGTTTTTAACCGCCATGTTGGGAGATTGATTTTGTCTTGAGCTCTGTATTGTAGTTGCCTTGTTGGAGTTGTACATAATGTTGTCTTTCGTAAACCATTTTGTAAATTAAGTCTAATGTTTATCAATAATGTA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00028	266326	269215	+

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:4.5.1

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K20535	MPK1_2	EC:2.7.11.24	MAPK signaling pathway - plant	map04016

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function

GO:0004672 protein kinase activity

GO:0004707 MAP kinase activity

GO:0005524 ATP binding

GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000028s00003528.1	PF00069.20	Pkinase	35	319	4.50E-75

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	32.155
SRR1783600	control	33.311
SRR1783602	moderate drought stress	28.588
SRR1811619	moderate drought stress	28.920

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	35.838
DRR006520	Root Summer glycyrrhizin high producing strain	35.690
DRR006521	Root Winter glycyrrhizin high producing strain	41.031
DRR006522	Root Winter glycyrrhizin high producing strain	40.742
DRR006523	Root Summer glycyrrhizin low producing strain	50.978
DRR006524	Root Summer glycyrrhizin low producing strain	51.909
DRR006525	Leaf Summer glycyrrhizin high producing strain	19.308
DRR006526	Leaf Summer glycyrrhizin high producing strain	19.104

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	33.469
SRR2868004	Drought Stress (root)	37.005
SRR2967015	Control (root)	39.672

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	17.652
SRR9715740	Leaf	20.755
SRR9715741	Leaf	18.839
SRR9715739	Root	15.259
SRR9715742	Root	24.716
SRR9715743	Root	23.739

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	41.788
SRR8749028	MeJA induced 9h	51.339
SRR8749029	MeJA induced 9h	44.826
SRR8749030	Uninduced	17.585
SRR8749031	Uninduced	29.375
SRR8749032	Uninduced	33.273

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	28.876
SRR8400027	Control - Root	30.625