Gene detail information of Glyur000028s00003525 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G27660.1 | 5.00E-45 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
| NR | KEH36186.1 | 1.16E-134 | BHLH transcription factor-like protein [Medicago truncatula] |
| Swissprot | tr|Q9SFZ3|BH110_ARATH | 2.00E-60 | Transcription factor bHLH110 |
| trEMBL | tr|A0A072V3D5|A0A072V3D5_MEDTR | 4.00E-135 | BHLH transcription factor-like protein {ECO:0000313|EMBL:KEH36186.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00028 | 230282 | 234650 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.662 |
| SRR1783600 | control | 5.749 |
| SRR1783602 | moderate drought stress | 12.412 |
| SRR1811619 | moderate drought stress | 12.308 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 10.606 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 10.729 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 11.798 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 12.010 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 11.583 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 11.500 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.767 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.785 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 11.720 |
| SRR2868004 | Drought Stress (root) | 15.480 |
| SRR2967015 | Control (root) | 20.742 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.712 |
| SRR9715740 | Leaf | 1.406 |
| SRR9715741 | Leaf | 1.011 |
| SRR9715739 | Root | 1.350 |
| SRR9715742 | Root | 5.414 |
| SRR9715743 | Root | 4.605 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.442 |
| SRR8749028 | MeJA induced 9h | 0.079 |
| SRR8749029 | MeJA induced 9h | 0.186 |
| SRR8749030 | Uninduced | 0.037 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.255 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 18.593 |
| SRR8400027 | Control - Root | 12.263 |