Gene detail information of Glyur000028s00003505 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_007136606.1 | 2.35E-39 | hypothetical protein PHAVU_009G059100g [Phaseolus vulgaris] |
| trEMBL | tr|V7ATG0|V7ATG0_PHAVU | 9.00E-40 | Uncharacterized protein {ECO:0000313|EMBL:ESW08600.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00028 | 123441 | 124427 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.141 |
| SRR1783600 | control | 5.057 |
| SRR1783602 | moderate drought stress | 5.099 |
| SRR1811619 | moderate drought stress | 3.707 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.417 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.733 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.909 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.434 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.149 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.286 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.570 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.858 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 12.916 |
| SRR2868004 | Drought Stress (root) | 7.733 |
| SRR2967015 | Control (root) | 8.312 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.079 |
| SRR9715740 | Leaf | 0.478 |
| SRR9715741 | Leaf | 0.202 |
| SRR9715739 | Root | 0.253 |
| SRR9715742 | Root | 1.022 |
| SRR9715743 | Root | 0.705 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.190 |
| SRR8749028 | MeJA induced 9h | 0.867 |
| SRR8749029 | MeJA induced 9h | 0.263 |
| SRR8749030 | Uninduced | 0.922 |
| SRR8749031 | Uninduced | 0.382 |
| SRR8749032 | Uninduced | 0.200 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 11.668 |
| SRR8400027 | Control - Root | 10.610 |