Gene detail information of Glyur000028s00003500 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G75260.1 | 3.00E-29 | oxidoreductases, acting on NADH or NADPH |
| NR | XP_003523821.1 | 2.20E-80 | PREDICTED: putative proline-rich receptor-like protein kinase PERK11-like [Glycine max] |
| trEMBL | tr|I1JTA1|I1JTA1_SOYBN | 8.00E-81 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA04G03340.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00028 | 105008 | 106366 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.492 |
| SRR1783600 | control | 1.630 |
| SRR1783602 | moderate drought stress | 1.552 |
| SRR1811619 | moderate drought stress | 1.584 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.311 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.024 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 6.637 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 6.326 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.098 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.073 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.867 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.762 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 8.158 |
| SRR2868004 | Drought Stress (root) | 6.310 |
| SRR2967015 | Control (root) | 5.429 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.944 |
| SRR9715740 | Leaf | 0.341 |
| SRR9715741 | Leaf | 0.681 |
| SRR9715739 | Root | 0.506 |
| SRR9715742 | Root | 2.420 |
| SRR9715743 | Root | 1.108 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 9.146 |
| SRR8749028 | MeJA induced 9h | 19.764 |
| SRR8749029 | MeJA induced 9h | 14.612 |
| SRR8749030 | Uninduced | 20.758 |
| SRR8749031 | Uninduced | 67.960 |
| SRR8749032 | Uninduced | 26.111 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.456 |
| SRR8400027 | Control - Root | 2.113 |