Gene detail information of Glyur000028s00003489 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G75210.1 | 0 | HAD-superfamily hydrolase, subfamily IG, 5'-nucleotidase |
| NR | XP_004501012.1 | 0 | PREDICTED: cytosolic purine 5'-nucleotidase-like [Cicer arietinum] |
| COG | YP_002492482.1 | 5.00E-92 | HAD superfamily hydrolase [Anaeromyxobacter dehalogenans 2CP-1] |
| trEMBL | tr|V7ASF0|V7ASF0_PHAVU | 0 | Uncharacterized protein {ECO:0000313|EMBL:ESW08587.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00028 | 66638 | 74633 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000028s00003489.1 | PF05761.9 | 5_nucleotid | 103 | 593 | 2.10E-132 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.207 |
| SRR1783600 | control | 3.258 |
| SRR1783602 | moderate drought stress | 3.040 |
| SRR1811619 | moderate drought stress | 2.913 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 9.363 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 9.031 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.173 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.138 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 6.347 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.183 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 26.549 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 26.061 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 24.867 |
| SRR2868004 | Drought Stress (root) | 25.401 |
| SRR2967015 | Control (root) | 30.794 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 23.337 |
| SRR9715740 | Leaf | 30.779 |
| SRR9715741 | Leaf | 16.022 |
| SRR9715739 | Root | 0.556 |
| SRR9715742 | Root | 5.037 |
| SRR9715743 | Root | 4.886 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.606 |
| SRR8749028 | MeJA induced 9h | 3.704 |
| SRR8749029 | MeJA induced 9h | 2.913 |
| SRR8749030 | Uninduced | 2.940 |
| SRR8749031 | Uninduced | 3.456 |
| SRR8749032 | Uninduced | 2.609 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 6.681 |
| SRR8400027 | Control - Root | 5.640 |