Gene detail information of Glyur000028s00003487 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G42765.1 | 1.00E-59 | |
| NR | XP_004501013.1 | 3.57E-138 | PREDICTED: uncharacterized protein LOC101503744 [Cicer arietinum] |
| trEMBL | tr|A0A072VDA3|A0A072VDA3_MEDTR | 7.00E-127 | Uncharacterized protein {ECO:0000313|EMBL:KEH36155.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00028 | 61288 | 65287 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 19.524 |
| SRR1783600 | control | 20.129 |
| SRR1783602 | moderate drought stress | 15.291 |
| SRR1811619 | moderate drought stress | 15.084 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 9.510 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 9.946 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 9.810 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 9.388 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.324 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.336 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 15.957 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 16.067 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 15.707 |
| SRR2868004 | Drought Stress (root) | 14.407 |
| SRR2967015 | Control (root) | 15.958 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 26.752 |
| SRR9715740 | Leaf | 26.557 |
| SRR9715741 | Leaf | 21.456 |
| SRR9715739 | Root | 14.276 |
| SRR9715742 | Root | 12.251 |
| SRR9715743 | Root | 14.814 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 12.331 |
| SRR8749028 | MeJA induced 9h | 5.680 |
| SRR8749029 | MeJA induced 9h | 6.034 |
| SRR8749030 | Uninduced | 4.668 |
| SRR8749031 | Uninduced | 3.728 |
| SRR8749032 | Uninduced | 4.464 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 27.510 |
| SRR8400027 | Control - Root | 29.960 |