Gene detail information of Glyur000028s00003478 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G65650.1 | 1.00E-22 | Protein of unknown function (DUF1195) |
| NR | XP_004501128.1 | 1.61E-66 | PREDICTED: uncharacterized protein LOC101512645 [Cicer arietinum] |
| trEMBL | tr|C6T2D8|C6T2D8_SOYBN | 4.00E-58 | Putative uncharacterized protein {ECO:0000313|EMBL:ACU15793.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00028 | 23653 | 25379 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000028s00003478.1 | PF06708.6 | DUF1195 | 8 | 134 | 1.00E-57 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.624 |
| SRR1783600 | control | 1.366 |
| SRR1783602 | moderate drought stress | 1.483 |
| SRR1811619 | moderate drought stress | 1.037 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.411 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.363 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 9.079 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 10.389 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 10.657 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 12.551 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.659 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.832 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 8.892 |
| SRR2868004 | Drought Stress (root) | 16.635 |
| SRR2967015 | Control (root) | 15.375 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.119 |
| SRR9715740 | Leaf | 1.539 |
| SRR9715741 | Leaf | 1.930 |
| SRR9715739 | Root | 1.667 |
| SRR9715742 | Root | 8.151 |
| SRR9715743 | Root | 4.889 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 78.004 |
| SRR8749028 | MeJA induced 9h | 39.283 |
| SRR8749029 | MeJA induced 9h | 23.926 |
| SRR8749030 | Uninduced | 13.539 |
| SRR8749031 | Uninduced | 3.409 |
| SRR8749032 | Uninduced | 5.329 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 6.501 |
| SRR8400027 | Control - Root | 5.059 |