Gene detail information of Glyur000028s00003475 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G42950.1 | 5.00E-95 | GYF domain-containing protein |
| NR | KHN22259.1 | 0 | GYF domain-containing protein mpd2 [Glycine soja] |
| trEMBL | tr|K7KSU9|K7KSU9_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA06G03570.3} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00028 | 531 | 3317 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.374 |
| SRR1783600 | control | 4.786 |
| SRR1783602 | moderate drought stress | 5.977 |
| SRR1811619 | moderate drought stress | 6.124 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.365 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.138 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.921 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.057 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.502 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.721 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.093 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.397 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 15.336 |
| SRR2868004 | Drought Stress (root) | 14.867 |
| SRR2967015 | Control (root) | 18.394 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.229 |
| SRR9715740 | Leaf | 2.940 |
| SRR9715741 | Leaf | 3.038 |
| SRR9715739 | Root | 0.912 |
| SRR9715742 | Root | 12.511 |
| SRR9715743 | Root | 11.125 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.862 |
| SRR8749028 | MeJA induced 9h | 15.457 |
| SRR8749029 | MeJA induced 9h | 2.289 |
| SRR8749030 | Uninduced | 2.504 |
| SRR8749031 | Uninduced | 6.412 |
| SRR8749032 | Uninduced | 1.873 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 12.367 |
| SRR8400027 | Control - Root | 11.925 |