Gene detail information of Glyur000027s00001581 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G58960.3 | 8.00E-146 | Plant protein of unknown function (DUF641) |
| NR | XP_004500214.1 | 0 | PREDICTED: uncharacterized protein LOC101509407 [Cicer arietinum] |
| trEMBL | tr|I1KYU1|I1KYU1_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G45140.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00027 | 461827 | 464395 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000027s00001581.1 | PF04859.7 | DUF641 | 80 | 201 | 1.40E-36 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 10.439 |
| SRR1783600 | control | 10.469 |
| SRR1783602 | moderate drought stress | 8.191 |
| SRR1811619 | moderate drought stress | 8.116 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 17.735 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 17.756 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.557 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.555 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 20.180 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 20.240 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 33.220 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 33.389 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 22.938 |
| SRR2868004 | Drought Stress (root) | 15.464 |
| SRR2967015 | Control (root) | 19.798 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 12.167 |
| SRR9715740 | Leaf | 19.402 |
| SRR9715741 | Leaf | 6.883 |
| SRR9715739 | Root | 14.074 |
| SRR9715742 | Root | 9.815 |
| SRR9715743 | Root | 10.746 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 11.326 |
| SRR8749028 | MeJA induced 9h | 6.791 |
| SRR8749029 | MeJA induced 9h | 4.165 |
| SRR8749030 | Uninduced | 1.935 |
| SRR8749031 | Uninduced | 0.414 |
| SRR8749032 | Uninduced | 1.494 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 15.971 |
| SRR8400027 | Control - Root | 24.505 |