Gene detail

Gene detail information of Glyur000027s00001580

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT3G54110.1	1.00E-94	plant uncoupling mitochondrial protein 1
NR	XP_004500212.1	0	PREDICTED: mitochondrial uncoupling protein 2-like isoform X1 [Cicer arietinum]
Swissprot	tr\|Q9ZWG1\|PUMP2_ARATH	4.00E-158	Mitochondrial uncoupling protein 2
trEMBL	tr\|A0A072V7J0\|A0A072V7J0_MEDTR	0	Uncoupling protein {ECO:0000313\|EMBL:KEH34145.1}

Sequence

Transcript Sequence

>Glyur000027s00001580.1
GGGGAAAGACNGAAAGTAACACAACTAAAACTACCTCTGCATATGTATTTACTGTGATGTGAAGTGGAAGTGGTTGCAACTGGTTTGTAGCATGATTTGATTTGATTTGATTTAATCGGAGAGAGGTTGCTTTCATGCTACTACCAGACCCAGTAGTACCATCCTTCTTAATCACTCACCCAATACCCCTTTTCCTTTTCCCAACTAACTAACCCCTTTCCCATTGCCCCCAATGTCAGATCCCAACCAGATTTCCTTCGCCCAAGCCTTCCTCTGCAGNGCTTTCGCCGCCTGTTTCGCCGAGTTTTGTACTATTCCTNTGGACACGGCTAAGGTGAGGCTTCAACTCCAGAAGAAGGCAGGGTTTAATAATGTCGATGACGGTGGAGTTGGTTTGGGTTCGGGTTCACCCAAATACAGGGGCTTGCTGGGAACCGTGAAGACCATTGCTCGTGAAGAAGGGGTTTCTGCTCTCTGGAAAGGCATTGTTCCCGGTTTGCATCGCCAGTGTTTGTATGGTGGCTTAAGAATTGGCTTATATGATCCCGTCAAAACTTTTCTGGTTGGTGCTGCTTTCGTTGGAGAGGTTCCTTTGTACCATATGATTCTTGCTGCTCTCATCACCGGTGCTTTGGCAATCACGGTTGCTAATCCCACTGACCTGGTCAAAGTTAGGCTTCAAGCTGAAGGCCTATTGCCATCTGGGGTACCTAAGCGTTATTCTGGTGCTATGGACGCCTATTCAACCATATTGAGACAAGAAGGGTTAGGGGCCTTGTGGACTGGGCTTGGGCCTAATATAGCACGAAATGCAATTATAAATGCTGCTGAACTAGCTAGTTATGATCAAGTGAAACAGACGATTTTGAAAATTCCAGGGTTCATGGACAATGTCTTTACTCACCTCCTAGCTGGCTTAGGTGCAGGTCTTTTTGCTGTCTTTATTGGTTCTCCTGTTGATGTGGTGAAATCCAGGATGATGGGGGACTCAAGCTACAAAAGCACATTCGACTGCTTTCTCAAGACTTTGTTCAATGAGGGATTTTTGGCCTTCTATAAAGGCTTCCTTCCTAATTTCGGTCGAATAGGAGCCTGGAATGTGATTATGTTTCTTACCCTTGAACAAGTAAGA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00027	457542	460674	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006839 mitochondrial transport

cellular_component
GO:0031966 mitochondrial membrane

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000027s00001580.1	PF00153.22	Mito_carr	6	111	1.70E-19
Glyur000027s00001580.1	PF00153.22	Mito_carr	119	212	8.30E-22
Glyur000027s00001580.1	PF00153.22	Mito_carr	220	299	3.10E-20

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	2.418
SRR1783600	control	2.426
SRR1783602	moderate drought stress	2.133
SRR1811619	moderate drought stress	2.092

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	5.747
DRR006520	Root Summer glycyrrhizin high producing strain	5.578
DRR006521	Root Winter glycyrrhizin high producing strain	1.501
DRR006522	Root Winter glycyrrhizin high producing strain	1.466
DRR006523	Root Summer glycyrrhizin low producing strain	3.847
DRR006524	Root Summer glycyrrhizin low producing strain	3.594
DRR006525	Leaf Summer glycyrrhizin high producing strain	3.662
DRR006526	Leaf Summer glycyrrhizin high producing strain	3.202

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	16.350
SRR2868004	Drought Stress (root)	10.201
SRR2967015	Control (root)	8.768

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	5.746
SRR9715740	Leaf	2.591
SRR9715741	Leaf	4.439
SRR9715739	Root	1.547
SRR9715742	Root	2.836
SRR9715743	Root	2.463

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	4.354
SRR8749028	MeJA induced 9h	4.112
SRR8749029	MeJA induced 9h	2.195
SRR8749030	Uninduced	0.986
SRR8749031	Uninduced	0.255
SRR8749032	Uninduced	0.409

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	15.696
SRR8400027	Control - Root	18.427