Gene detail information of Glyur000027s00001569 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G20898.1 | 2.00E-12 | |
| NR | NP_001240164.1 | 4.35E-41 | uncharacterized protein LOC100806243 [Glycine max] |
| trEMBL | tr|C6TGL1|C6TGL1_SOYBN | 2.00E-41 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G07870.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00027 | 408897 | 409343 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 195.363 |
| SRR1783600 | control | 234.257 |
| SRR1783602 | moderate drought stress | 223.958 |
| SRR1811619 | moderate drought stress | 204.143 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 40.389 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 29.259 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 29.403 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 29.570 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 36.604 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 38.709 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 8.785 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.354 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 25.830 |
| SRR2868004 | Drought Stress (root) | 25.367 |
| SRR2967015 | Control (root) | 35.444 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 10.719 |
| SRR9715740 | Leaf | 16.677 |
| SRR9715741 | Leaf | 14.013 |
| SRR9715739 | Root | 14.333 |
| SRR9715742 | Root | 49.881 |
| SRR9715743 | Root | 43.418 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 63.997 |
| SRR8749028 | MeJA induced 9h | 179.899 |
| SRR8749029 | MeJA induced 9h | 96.980 |
| SRR8749030 | Uninduced | 4.880 |
| SRR8749031 | Uninduced | 10.911 |
| SRR8749032 | Uninduced | 17.041 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 53.599 |
| SRR8400027 | Control - Root | 41.028 |