Gene detail information of Glyur000027s00001563 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G56120.1 | 1.00E-58 | |
| NR | XP_003530828.2 | 2.73E-116 | PREDICTED: uncharacterized protein LOC100801421 [Glycine max] |
| trEMBL | tr|I1KYS5|I1KYS5_SOYBN | 4.00E-117 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G44970.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00027 | 375332 | 376437 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 11.562 |
| SRR1783600 | control | 11.500 |
| SRR1783602 | moderate drought stress | 7.496 |
| SRR1811619 | moderate drought stress | 7.103 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 20.757 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 20.320 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.302 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.692 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.458 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.395 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.141 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.933 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 60.447 |
| SRR2868004 | Drought Stress (root) | 24.588 |
| SRR2967015 | Control (root) | 35.485 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.320 |
| SRR9715740 | Leaf | 1.176 |
| SRR9715741 | Leaf | 1.407 |
| SRR9715739 | Root | 5.395 |
| SRR9715742 | Root | 3.995 |
| SRR9715743 | Root | 3.925 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 17.491 |
| SRR8749028 | MeJA induced 9h | 13.610 |
| SRR8749029 | MeJA induced 9h | 8.187 |
| SRR8749030 | Uninduced | 0.055 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.514 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 67.223 |
| SRR8400027 | Control - Root | 58.606 |