Gene detail information of Glyur000027s00001560 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G23810.1 | 3.00E-143 | amino acid permease 7 |
| NR | KEH34119.1 | 0 | transmembrane amino acid transporter family protein [Medicago truncatula] |
| Swissprot | tr|Q9FF99|AAP7_ARATH | 1.00E-175 | Probable amino acid permease 7 |
| trEMBL | tr|A0A072UWA4|A0A072UWA4_MEDTR | 0 | Transmembrane amino acid transporter family protein {ECO:0000313|EMBL:KEH34119.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00027 | 345013 | 350230 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000027s00001560.1 | PF01490.13 | Aa_trans | 30 | 461 | 4.20E-93 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 12.511 |
| SRR1783600 | control | 12.268 |
| SRR1783602 | moderate drought stress | 8.347 |
| SRR1811619 | moderate drought stress | 8.507 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 13.646 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 14.068 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 26.781 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 26.271 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 14.963 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 14.324 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 8.307 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 8.222 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 67.073 |
| SRR2868004 | Drought Stress (root) | 48.407 |
| SRR2967015 | Control (root) | 41.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 12.152 |
| SRR9715740 | Leaf | 6.395 |
| SRR9715741 | Leaf | 12.358 |
| SRR9715739 | Root | 5.604 |
| SRR9715742 | Root | 11.231 |
| SRR9715743 | Root | 9.559 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 38.894 |
| SRR8749028 | MeJA induced 9h | 129.810 |
| SRR8749029 | MeJA induced 9h | 47.081 |
| SRR8749030 | Uninduced | 99.359 |
| SRR8749031 | Uninduced | 100.855 |
| SRR8749032 | Uninduced | 54.696 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 31.691 |
| SRR8400027 | Control - Root | 20.362 |