Gene detail information of Glyur000027s00001558 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G23810.1 | 2.00E-127 | amino acid permease 7 |
| NR | XP_003551361.1 | 0 | PREDICTED: probable amino acid permease 7-like isoform X1 [Glycine max] |
| Swissprot | tr|Q9FF99|AAP7_ARATH | 2.00E-155 | Probable amino acid permease 7 |
| trEMBL | tr|I1N062|I1N062_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G08000.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00027 | 337365 | 340941 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000027s00001558.1 | PF01490.13 | Aa_trans | 43 | 220 | 3.90E-41 |
| Glyur000027s00001558.1 | PF01490.13 | Aa_trans | 225 | 430 | 8.80E-45 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.290 |
| SRR1783600 | control | 1.286 |
| SRR1783602 | moderate drought stress | 1.470 |
| SRR1811619 | moderate drought stress | 1.296 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 10.358 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 10.475 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.331 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.454 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.776 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.831 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 20.664 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 20.502 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 34.665 |
| SRR2868004 | Drought Stress (root) | 24.225 |
| SRR2967015 | Control (root) | 20.268 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 6.203 |
| SRR9715740 | Leaf | 2.141 |
| SRR9715741 | Leaf | 3.334 |
| SRR9715739 | Root | 1.631 |
| SRR9715742 | Root | 5.146 |
| SRR9715743 | Root | 3.533 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.067 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.014 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 8.421 |
| SRR8400027 | Control - Root | 10.769 |