Gene detail information of Glyur000027s00001554 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G13310.1 | 8.00E-21 | Chaperone DnaJ-domain superfamily protein |
| NR | XP_004500165.1 | 1.33E-71 | PREDICTED: chaperone protein dnaJ 11, chloroplastic-like [Cicer arietinum] |
| COG | YP_006545691.1 | 3.00E-15 | Chaperone protein dnaJ [Methanoculleus bourgensis MS2] |
| Swissprot | tr|Q9FYB5|DNJ11_ARATH | 2.00E-18 | Chaperone protein dnaJ 11, chloroplastic (Precursor) |
| trEMBL | tr|G7IY77|G7IY77_MEDTR | 9.00E-66 | Uncharacterized protein {ECO:0000313|EMBL:AFK46742.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00027 | 293949 | 294431 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000027s00001554.1 | PF00226.26 | DnaJ | 59 | 122 | 8.40E-20 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 20.322 |
| SRR1783600 | control | 22.151 |
| SRR1783602 | moderate drought stress | 16.535 |
| SRR1811619 | moderate drought stress | 15.965 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 19.892 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 20.433 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 5.067 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.108 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 13.983 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 13.722 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 99.679 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 99.347 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 49.267 |
| SRR2868004 | Drought Stress (root) | 96.727 |
| SRR2967015 | Control (root) | 92.288 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 350.226 |
| SRR9715740 | Leaf | 263.267 |
| SRR9715741 | Leaf | 268.133 |
| SRR9715739 | Root | 25.974 |
| SRR9715742 | Root | 19.409 |
| SRR9715743 | Root | 24.957 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 187.340 |
| SRR8749028 | MeJA induced 9h | 175.484 |
| SRR8749029 | MeJA induced 9h | 259.120 |
| SRR8749030 | Uninduced | 1.986 |
| SRR8749031 | Uninduced | 2.029 |
| SRR8749032 | Uninduced | 37.067 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 29.503 |
| SRR8400027 | Control - Root | 15.320 |