Gene detail

Gene detail information of Glyur000027s00001540

Functional Annotation

Database	Orthologs	Annotation
TAIR	AT3G44730.1	kinesin-like protein 1
NR	XP_003537070.1	PREDICTED: kinesin-4-like [Glycine max]
Swissprot	tr\|Q8W1Y3\|KP1_ARATH	Kinesin KP1
trEMBL	tr\|I1L9D8\|I1L9D8_SOYBN	Kinesin-like protein {ECO:0000256\|RuleBase:RU000394}

Sequence

Transcript Sequence

>Glyur000027s00001540.1
AATGGAAACTTTAACGTTTAAAATTAAAGGTCGACCCTTCTAAGCTTTGCCTATCTCATTCAGTCATTCTCCCTCCACTCTCCACTCACACTAACAAACATTGAAACCCAAGCTACATTTAACGTCAAAATCTCTTGGTATTTTTGAAGGCAGGCTCATTCAGTTCAGTTCAGCTTCCATAAACCTTAATCACACAAATTAAGCTTCAGTTTCTTGCTCTCAACCAATTCCCTTCTTCTCCAGGAGAAGGATGCCACAGGAGAGTTCCCAAAACNCATTTTTCACATCTCCTTCAAAGAGAGGATTGAAGGGTCTGGTTTCTATCAACAACAACAAGAAGGAGGCTTCATGCACTGCCACAGAGGAGAGTTTCAACGATCGTGATTTGGCTCAGAGGAAAGCAGAGGAAGCAGCCTCAAGGAGATACGAAGCAACGGGATGGCTGAGGGAGATGGACGAAGTGGGAAGGGCGACGCTGTCACCAAAACCGTCGGAAGAAGAGTTCTGCCTGGCACTGCGCAATGGCCTCATTCTCTGCAACGTCCTCAACAAAGTCAACCCCGGTGCTGTTCTCAAGGTGGTGGACAATCCTGCCCTTGCTCTTCATCATCATTCCGCAGAGGGGGCAGCACACTCTGCCATTCAGTATTTCGAGAACATGAGGAACTTTCTGGAAGCTGTCAAGGACATGCACCTTTTGACCTTTGAAGCTTCCGATTTGGAGAAGGGGGGTTCATCAAATAAAGTTGTGGACTGCATTCTATGTTTGAAGGGGTACTATGAATGGAAGCTATCTGGTGGAGTTGGTGTGTGGAGGTATGGGGGAACTGTGAGGATTACTTCCCTCCCAAAGAGGTCTCCTTCCTCCATAGTTGGAAGTGAAAGTGCTGATGAATCACTGGACGAGTCAGAGTCATCACAGTATGAACAGCTGCTAGAATTTCTTCACCTATCTGAAGAATTCTTGAATGAAGAAACCAAAACTGCCAATGCTCTGGCTTTCCTTTTTGATCACTTTGGACTCAGACTTCTTCAGGCTTACCTTAGAGAGACAGATGGGATTGAAGATCTGCCTCTGAATGCAATGGTAATTGATGCCTTACTCGGCAAGGTAGTCAAGGATTTCTCATCTTTGCTTGTTTCTCAAGGCACTGAGCTTGGACATTTCCTGAAGAAAATATTAAAAGGGGATATTGGTTGTCTCTCAAGGAGGGAGTTTATAGAAGCTATCTCACTATATCTTAATCAAAGAAGGAGTTTGGCATCAAATGATTTCTCTAAATTCTGCATTTGTGGTGGCAAGCGTGATAGCATTCGACAAAATGTCAATTATTCTGCCAAATATGCTGAAGTAATCAATACTCAACATAAACAACTTGAGGGGATGAAATACTTTTTTGAAGAGACAAAACTGGAGGTCAAACAAATTCAATCGGAGTGGGAACAAGAATTTAGTAGGCTAGAGCATCATATCAAGAACCTTGAAGTGGCCTCCTCTTCTTACCACAAAGTTTTGGAAGAGAATCGTTACCTTTACAACCAAGTACAAGACCTGAAAGGAGCCATTAGGGTCTATTGTAGAGTGAGACCCTTCTTACCAGGACAATCAAATGGACAGTCTACTGTAGACTATATTGGAGAAAATGGAGACATGATGATTGTAAATCCCTTCAAGCAAGGAAAAGATGCAAGAAGGATATTTTCATTCAATAAGGTGTTTGGAACAAGGGTAACACAAGAACAAATTTATGCTGACACTCAATCGTTGGTCAGGTCTGTTTTAGATGGTTATAATGTATGCATCTTTGCATATGGACAGACTGGCTCAGGAAAGACCTACACAATGTTCTGCCAATTTGATTGCATGATCGCTGGTCATCTTCTCCATGGTCTCCATACGTTGTTCCATCGTGATCAAGAAGAAAAGGGCAGATATACATTAGATATACGAAACAATTCTCAACTGAATGGCATCAATGTGCCTGATGCATTTTTAGTTCCGGTTACTTGTACTCAAGATGTTCTAGATTTAATGAGAATTGGTCAGAAGAACCGTGCTGTGGGTGCTACAGCTCTAAATGAGAGAAGCAGTCGTTCTCATAGGGAGTTAGTTTCTAACTCCATTCTAAGGGGTTGTCTCCATCTTGTGGATTTGGCTGGAAGTGAGAGGGTTGACAAATCTGAGGCTGTTGGTGAGAGACTAAAGGAGGCCCAACATATAAACAGATCACTTTCAGCACTTGGGGATGTTATTTCTGCTTTGGCACAGAAAAGTCCACATATCCCTTACAGAAATAGCAAGCTCACGCAAGTATTACAAGATTCTTTAGGAGGGCATGCAAAAACTTTGATGTTTGTTCATATAAATCCTGAACTTAATGCTATTGGGGAGACAATTAGCACACTCAAGTTTGCTGAGAGGGTTTCATCCATTGAACTTGGGGCTGCTCAGTCTAATAAAGAAACTGGGGAAATCCGAGAACTAAAGGAAGAGATATCAAGTCTCAAACAGGCACTGGAGGGGAAGGAAAAAGAGCTGGAGCAGTGGAAAGCTGGGAATGCTCGAAACACTATAGAGTCTCAGAAACCAAGAGCTGTTTCACCTTTTCATTTGCCCAAATATGGCACCAGCAGCAACATGAAACCTGAAACTAGTCAACGATTTATGGATGATAGAAGCTCTGAGGCTAGAAGTTGCTCTTCTGGTAAGCAAAGAAGGTCAAGGTTTCCCTCAGCATTTATGGACAAGGAGTCCATGCCAAAAATGTCTCTTCTCACTGAAGAAAAATTAGTGAGCTCGGGGAAAGGAAGATCACCATCACCTCCAGTCAGAAGATCAGTATCTAATGATAGAGGGTCAGTCATTAAAAGCAAGGTCAAAATTGACACGGCAGACAACCAACCAATAATAAAGCATCCATTTCCAGCTAGAGTACCTGCTAACAAATCCCTTGTCACAATGCCAATGGCTGCATCCCTTGACAATAATGCAAGGTTGCATGTGAATTCACAAGAGCCAGTAAAGCAGGAAAGCATTTCTGAAACACTCTTTAACCTCCAGAAGGTCAACACAAGGAAAGTTCATCAAGAACTTGAAGAGGAACAATTCAAGCAAGCACTTAGTGCAGTAAGACAAGGCGGTATTAGAAAAAGCAAGGTCGAAAGTAAGGCTAAGGCCAAGCATCATCAACTATCGCCCTTTAAGATTCAAAAGCCTGATTTGATGCCAACATTTATTTCTGACATGGAATTTGCTGGTGAAAAGACTGTGGAGACACCTCCAAAGAGTGATTACTCCGAGCCTGAAAATGATCTTAGATTTATTGAGTCTGCTGTCCATGGTGCTTTACATCTCAATAAGATACGTCAGAACTTTCCAAGGAATTTTCAGAACCTTGAATCAAGAGGAATAGTGCAACCAGGAGAGCCTTTATCGGCTACCAAAGTTGAAAACAAACTTTTGAATGGTTCACGTAGCAATCATAAAGAAGGAAATAATACAACCATGCCTGAATTTAGAAGGAGCCGATCTACCCCACGTGGAAAGCTTTTTGGTTTATCTTGAGGTTTTCATGTTAAACAGTGACAGAATTTTTAAAAATATATAATTTATTTTGTTACAGGAACTACTACAGAAGTTGGAGTTCCAGCTTACATAATTTTACACAAACTTTTGAAGTCTTGAGTTTAATCAGTGCTGCCTACTACTCTCTTGNATTCTGAGCATGCTTTGTAATTTAAACTTCATATATCAATATGCATTTACAAGTCATTGAGTCACCTATATATGCTTTGGCCTTAAAACATTAGCTCCTATGATATGATGTCCCATATAGATAAGGAAAGGAAGGACTGTTCCGTGGCCTCAGCACCTTTGTTTTGAGTGGGATATGATACGATGTCATTAATTTATTAACTTCTTATTAAGGGTAGACGGGCAGGATCATCCACAGTGCACAATTGGGACATCCAATTTGATGCCAAACTGGAAATCCATTATTGGTAGGGTCCATNCATGTTTCTTCAGAATGTAAGAAGTGCACAATGCATGGACTTGTATGAAGCCTCCGTTGGCACTTAATAATAATGTGGCAACAAATTATTCATGTGAATGCTTCCATTTGATAAAGGACAAGGTCACATGGGGTCAGAATGCATAATAAGATTGTACTGTCCAAGTACAAT

Protein Sequence

>Glyur000027s00001540.1
MPQESSQNXFFTSPSKRGLKGLVSINNNKKEASCTATEESFNDRDLAQRKAEEAASRRYEATGWLREMDEVGRATLSPKPSEEEFCLALRNGLILCNVLNKVNPGAVLKVVDNPALALHHHSAEGAAHSAIQYFENMRNFLEAVKDMHLLTFEASDLEKGGSSNKVVDCILCLKGYYEWKLSGGVGVWRYGGTVRITSLPKRSPSSIVGSESADESLDESESSQYEQLLEFLHLSEEFLNEETKTANALAFLFDHFGLRLLQAYLRETDGIEDLPLNAMVIDALLGKVVKDFSSLLVSQGTELGHFLKKILKGDIGCLSRREFIEAISLYLNQRRSLASNDFSKFCICGGKRDSIRQNVNYSAKYAEVINTQHKQLEGMKYFFEETKLEVKQIQSEWEQEFSRLEHHIKNLEVASSSYHKVLEENRYLYNQVQDLKGAIRVYCRVRPFLPGQSNGQSTVDYIGENGDMMIVNPFKQGKDARRIFSFNKVFGTRVTQEQIYADTQSLVRSVLDGYNVCIFAYGQTGSGKTYTMFCQFDCMIAGHLLHGLHTLFHRDQEEKGRYTLDIRNNSQLNGINVPDAFLVPVTCTQDVLDLMRIGQKNRAVGATALNERSSRSHRELVSNSILRGCLHLVDLAGSERVDKSEAVGERLKEAQHINRSLSALGDVISALAQKSPHIPYRNSKLTQVLQDSLGGHAKTLMFVHINPELNAIGETISTLKFAERVSSIELGAAQSNKETGEIRELKEEISSLKQALEGKEKELEQWKAGNARNTIESQKPRAVSPFHLPKYGTSSNMKPETSQRFMDDRSSEARSCSSGKQRRSRFPSAFMDKESMPKMSLLTEEKLVSSGKGRSPSPPVRRSVSNDRGSVIKSKVKIDTADNQPIIKHPFPARVPANKSLVTMPMAASLDNNARLHVNSQEPVKQESISETLFNLQKVNTRKVHQELEEEQFKQALSAVRQGGIRKSKVESKAKAKHHQLSPFKIQKPDLMPTFISDMEFAGEKTVETPPKSDYSEPENDLRFIESAVHGALHLNKIRQNFPRNFQNLESRGIVQPGEPLSATKVENKLLNGSRSNHKEGNNTTMPEFRRSRSTPRGKLFGLS

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00027	204127	216071	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0007018 microtubule-based movement

cellular_component
GO:0005871 kinesin complex

molecular_function

GO:0003777 microtubule motor activity

GO:0005515 protein binding

GO:0005524 ATP binding

GO:0008017 microtubule binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000027s00001540.1	PF00307.26	CH	84	178	1.50E-07
Glyur000027s00001540.1	PF00225.18	Kinesin	554	728	2.10E-54

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	3.516
SRR1783600	control	3.489
SRR1783602	moderate drought stress	3.262
SRR1811619	moderate drought stress	3.145

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	10.280
DRR006520	Root Summer glycyrrhizin high producing strain	9.995
DRR006521	Root Winter glycyrrhizin high producing strain	0.269
DRR006522	Root Winter glycyrrhizin high producing strain	0.260
DRR006523	Root Summer glycyrrhizin low producing strain	4.143
DRR006524	Root Summer glycyrrhizin low producing strain	4.395
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.885
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.836

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	22.401
SRR2868004	Drought Stress (root)	15.822
SRR2967015	Control (root)	21.237

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	0.792
SRR9715740	Leaf	0.210
SRR9715741	Leaf	0.977
SRR9715739	Root	0.264
SRR9715742	Root	2.844
SRR9715743	Root	3.133

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	3.196
SRR8749028	MeJA induced 9h	10.046
SRR8749029	MeJA induced 9h	2.234
SRR8749030	Uninduced	3.348
SRR8749031	Uninduced	2.993
SRR8749032	Uninduced	1.586

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	15.087
SRR8400027	Control - Root	23.225