Gene detail information of Glyur000027s00001530 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G55980.1 | 7.00E-12 | serine-rich protein-related |
| NR | KEH34101.1 | 1.16E-38 | PGPS/D10 protein, putative [Medicago truncatula] |
| trEMBL | tr|A0A072UXD4|A0A072UXD4_MEDTR | 4.00E-39 | PGPS/D10 protein, putative {ECO:0000313|EMBL:KEH34101.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00027 | 152952 | 153260 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.491 |
| SRR1783600 | control | 0.110 |
| SRR1783602 | moderate drought stress | 0.889 |
| SRR1811619 | moderate drought stress | 0.647 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 5.096 |
| SRR2868004 | Drought Stress (root) | 2.085 |
| SRR2967015 | Control (root) | 9.435 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.327 |
| SRR9715740 | Leaf | 0.032 |
| SRR9715741 | Leaf | 0.092 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 4.940 |
| SRR8749028 | MeJA induced 9h | 26.690 |
| SRR8749029 | MeJA induced 9h | 9.726 |
| SRR8749030 | Uninduced | 4.952 |
| SRR8749031 | Uninduced | 15.689 |
| SRR8749032 | Uninduced | 12.189 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 7.840 |
| SRR8400027 | Control - Root | 3.701 |