Gene detail information of Glyur000027s00001524 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G55960.1 | 0 | |
| NR | XP_004498151.1 | 0 | PREDICTED: uncharacterized protein LOC101508986 isoform X1 [Cicer arietinum] |
| trEMBL | tr|V7B3G8|V7B3G8_PHAVU | 0 | Uncharacterized protein {ECO:0000313|EMBL:ESW12110.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00027 | 129907 | 132626 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000027s00001524.1 | PF01594.11 | UPF0118 | 444 | 645 | 9.50E-13 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 9.069 |
| SRR1783600 | control | 9.344 |
| SRR1783602 | moderate drought stress | 5.896 |
| SRR1811619 | moderate drought stress | 5.710 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 13.440 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 13.313 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 14.980 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 14.848 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 15.489 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 15.301 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 9.406 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 9.427 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 26.073 |
| SRR2868004 | Drought Stress (root) | 25.544 |
| SRR2967015 | Control (root) | 22.881 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 20.355 |
| SRR9715740 | Leaf | 20.231 |
| SRR9715741 | Leaf | 20.424 |
| SRR9715739 | Root | 15.555 |
| SRR9715742 | Root | 17.614 |
| SRR9715743 | Root | 17.006 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.725 |
| SRR8749028 | MeJA induced 9h | 7.099 |
| SRR8749029 | MeJA induced 9h | 2.626 |
| SRR8749030 | Uninduced | 5.464 |
| SRR8749031 | Uninduced | 1.635 |
| SRR8749032 | Uninduced | 1.957 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 19.078 |
| SRR8400027 | Control - Root | 24.970 |