Gene detail

Gene detail information of Glyur000026s00001957

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT2G22590.1	4.00E-115	UDP-Glycosyltransferase superfamily protein
NR	XP_003547595.1	0	PREDICTED: soyasaponin III rhamnosyltransferase-like [Glycine max]
Swissprot	tr\|D4Q9Z5\|SGT3_SOYBN	0	Soyasaponin III rhamnosyltransferase
trEMBL	tr\|K7M9P8\|K7M9P8_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA15G05710.2}

Sequence

Transcript Sequence

>Glyur000026s00001957.1
ATGGGCTTGCTAGATGGAACCAAGAAGCCACATGCTCTTCTGATCCCATTTCCCACACAAGGTCACATAAACCCATTTCTCAAACTAGCAAAGCTCCTACACTGCAAAGGTTTCTACATAACTTTTGTGAACACTGAGTTCAACCACAAACGCTTGCTCAAGTCCAGAGGCCCCATTGCTCTCAATGGGATACCAGATTTCCACTTTGAGACCATCCCAGATGCCTCTTATCAAGACTTAAATGACCCTCAGGCTTCCGATGCTCCTCCAGTGACTTGCATAATCTCGGATGGTATCATGTCCTTCACAATTAAAGCCTCTCAGCAATTTGGGTTGCCCAACATATTCTTTTGGACTAACAGTGCTTGTGGTTTCACGAGCTTCAAACAATGCAAGAATCTCATGGAGAAGGGCCTAACTCCACTTAGAGATTCGAGCTATCTGACAAACGGGCATTTAGACACCATCATAGACTGGATCCCTGGCATGAAGAATATTACTCTAAGGGACCTTCCTGGCATATACCGTGCCACAGATCCAAATGATATACTTTTGGACTTTGTGGTAGAGCAAATTGAAGGAACATCAAAAGCTTCTGCTGTTACTCTGCCCACCTTTGATGCCTTGGAGCCTGATTTGCTGAATGCACTCTCCACAATGTTTCCTAAACTCTACACCATAGGCCCACTAGAGTTGCTCCTTGATCAAGTTTCAGAGGACCGATTTGAAACTATTAAATGTAATTTGTGGAAAGAAGAGTCTGAATTAGATAAAAGAGCGACAGACCAGTTTAAGTCCAGAAAAATATTCATGGACTTTACTACTTCAATTTCATCCAATGGCAAAACTGATAAGCAGCCTCTTCATGTTGTCATGTTCCCATGGCTAGCCATGGGTCACATGTACCCCTGCTTCGAGGTATCCAAGATTCTTGCACAAAAGGGTCATTTCGTCACCCTCATCTCCACCCCAAGAATCATAGATCGCCTCCCTAAACTCCCACAAAGCCTGTCCCCATTTGTTAAACTCACCAAATTGCNCTTGTCACCCCACATAGACAAAAACCATCTCCCAGAAGATGCTGAGTCCACCATGGACATTCCCTCCAGCAAGCTCTACTACCTCAAATTGGCCTATGATGGTCTCCAACAATCTGTAGCTGAGGTACTAAAGACCTCAAATCCTGATTGGGTTTTCTTTGATTTTGCAGCCAGCTGGGTACCACAGCTAGCCAAGAGCCTCAACATTCCTTGTGCCTATTTTAGTCCATGCCCTGCATGGAGCATCTGCTTCTTTGACACACCAAAAGAACAACTTGGTGATACTGCTGCAGCAAATAGAACAAAGCCTGAGGATTATTATGGCCCACCCAAGTGGGTCTCTTTTCCCACCAAGATTGGTCTAAGACCTTATGAGGTCAGAAAGTTGCTTGAAGACATCAAGGTTAATGAAACAGGAGCTTCACCTGNTTTTGATCTCAACAAGGCAAATTCTGGGTGTGACATGTTTGTTATCAGAAGCTCGAGGGATCTTGAACCAGAGTGGTTGGATTATCTTGCTGAGTTTTACAACAAGCCAGTGATTCCCGTGGGATTGCTTCCACCATCAATGCAAATAGGAGCTTCTGATGAGGCAGACAATAGTCCTGATTGGCTCCAAATCAAAGCCTGGCTAGACACACAACAAGGGTCATCGGTAGTGTACATTGCATTTGGGAGTGAGGTGAAACTGAGCCAAGAAAACCTCAATGAATTGGCTCTTGGAATTGAGCTTTCTGGGTTGCCTTTCTTTTGGGTTCTGAGGGACCTGAAGAAGGGCTCAGTTGAGTTACCAGATGGGTTTGAGGATCGGACCAAGGATCTTGGCGTGGTGTGGAAATCTTGGGCACCACAACCTAAGATCTTAGCTCATGGTTCAGTTGGTGGCTGTTTGACTCACTGTGGTTCTGGTTCAATGATAGAAAATCTCCATTTTGGACACGTTCTTGTTATGTTGCCCTTCTTATTGGACCAAGCTTTGTATTCAAGAGCGATGGGAGAGAAGAGAGTTGGGATTGAGATACCAAGGAACGAGCAAGACGGGTCTTTTACAAGGAGCTCAGTGGCCAAGGCATTGAGATTGGCAATGGTGGATGAAGAGGGAAGTGATTATAGGAAGAATGCTAAAGAGATGGGCAAGAAATTCAGTAACAAGGAGCTCCATAATCAATACATAGAAAACTTTATTTCTTCCCTTCACAGTCACAATCACAAGCATAGGTAG

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00026	558396	562254	+

Gene family

Gene family	subfamily
Carbohydrate-Active enzymes Family	GT1

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0008152 metabolic process

molecular_function
GO:0016758 transferase activity, transferring hexosyl groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000026s00001957.1	PF00201.13	UDPGT	529	722	2.60E-17

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	34.635
SRR1783600	control	34.526
SRR1783602	moderate drought stress	9.646
SRR1811619	moderate drought stress	9.478

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	11.405
DRR006520	Root Summer glycyrrhizin high producing strain	11.323
DRR006521	Root Winter glycyrrhizin high producing strain	0.291
DRR006522	Root Winter glycyrrhizin high producing strain	0.240
DRR006523	Root Summer glycyrrhizin low producing strain	0.543
DRR006524	Root Summer glycyrrhizin low producing strain	0.492
DRR006525	Leaf Summer glycyrrhizin high producing strain	12.873
DRR006526	Leaf Summer glycyrrhizin high producing strain	13.089

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	51.826
SRR2868004	Drought Stress (root)	19.670
SRR2967015	Control (root)	16.590

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	10.098
SRR9715740	Leaf	18.330
SRR9715741	Leaf	11.187
SRR9715739	Root	8.381
SRR9715742	Root	22.224
SRR9715743	Root	20.610

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.128
SRR8749028	MeJA induced 9h	0.469
SRR8749029	MeJA induced 9h	0.101
SRR8749030	Uninduced	0.162
SRR8749031	Uninduced	0.034
SRR8749032	Uninduced	0.025

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	36.170
SRR8400027	Control - Root	22.835