Gene detail

Gene detail information of Glyur000026s00001949

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G25980.1	5.00E-127	Peroxidase superfamily protein
NR	XP_006597341.1	0	PREDICTED: peroxidase 43 [Glycine max]
Swissprot	tr\|Q9SZH2\|PER43_ARATH	4.00E-159	Peroxidase 43 (Precursor)
trEMBL	tr\|I1MDU1\|I1MDU1_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA15G05650.1}

Sequence

Transcript Sequence

>Glyur000026s00001949.1
TGATGGTGTCCTTTGTTTTGTCTCTCCTGTTCTTCTCATTCTTAATGGGTGGTTCTGAGGGTCAGCTTCAAGTGGGTTTCTACTCCAACACATGTCCCCAAGTAGAGCCCACTGTACATGCCGTTGTTAGAGAAGCTGTTCTCTCTGACCCCAACATGGCTGCTGTCTTGCTCAGGCTTCATTTTCATGACTGCTTTGTTGAGGGATGTGATGGTTCAATTCTGATAGATAATGGTCCACAATCGGAGAAGCTAGCATTCGCACATCAAGGGGTGAGAGGGTTTGAGGTGATAGAAAGAGCCAAGGCACAATTGGAAGGTTCTTGCCCAGGCGTTGTTTCTTGTGCGGACATAGTGGCATTGGCAGCCAGAGATGCAATAGTCATGACAAATGGACCAACATACCAAGTTCCAACAGGGAGGAGAGATGGGTTGGTTTCCAATATTTCGCTTGCAGANGACATGCCAGATGTTAGTGATTCAATTCAGTTACTCAAGGCCAAGTTTCTGAACAAGGGACTCACAGAGAAAGACCTTGTCCTTCTCAGTGCTGCACATACAATTGGAACCACAGCGTGCTTCTTCATGACCAAAAGACTATACAACTTTTTCCCAGCTGGTGGGGGATCAGACCCCGCTATTAGCCCAAACTTCCTCCCACAGCTGAAGGCAAGGTGCCCTCAGAATGGAGACATTAACGCCCGTTTGGCCATTGATGAAGGGAGTGAGCAGAGATTTGACAAGCACATCTTGAAGAACATAAGGGAAGGATTTGCTGTGCTAGAATCTGATGCAAGGCTTAATGACGACATAGTGACTAAGACCATCATTGATTCCTATGTTGGTCCCCTCAATCCATTCTTTGGACCTTCTTTTCAAGCTGATTTTGTTGAGTCAATTGCGAAGATGGGTCAAATTGGAGTCAAGACAGGCTTCCTTGGTGAGATTAGGCCTTGCTTGTTGACTGATACAATTGACATGATACAATTGACATCAGGTGAACATGATACTCTCACAGAAGATGCTGTATCTTGGTTGATGAACTCCAAGCTGTTGCGT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00026	528753	531958	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K00430	E1.11.1.7	EC:1.11.1.7	Phenylpropanoid biosynthesis	map00940

Gene Ontology

biological_process

GO:0006979 response to oxidative stress

GO:0055114 oxidation-reduction process

molecular_function

GO:0004601 peroxidase activity

GO:0020037 heme binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000026s00001949.1	PF00141.18	peroxidase	39	279	1.90E-62

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	5.899
SRR1783600	control	6.083
SRR1783602	moderate drought stress	4.128
SRR1811619	moderate drought stress	3.862

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.563
DRR006520	Root Summer glycyrrhizin high producing strain	0.611
DRR006521	Root Winter glycyrrhizin high producing strain	0.123
DRR006522	Root Winter glycyrrhizin high producing strain	0.072
DRR006523	Root Summer glycyrrhizin low producing strain	0.002
DRR006524	Root Summer glycyrrhizin low producing strain	0.000
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.348
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.255

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	15.608
SRR2868004	Drought Stress (root)	10.740
SRR2967015	Control (root)	20.149

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	0.124
SRR9715740	Leaf	0.107
SRR9715741	Leaf	0.086
SRR9715739	Root	15.281
SRR9715742	Root	8.131
SRR9715743	Root	8.554

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.381
SRR8749028	MeJA induced 9h	0.168
SRR8749029	MeJA induced 9h	0.160
SRR8749030	Uninduced	0.105
SRR8749031	Uninduced	0.594
SRR8749032	Uninduced	0.161

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	21.146
SRR8400027	Control - Root	15.509