Gene detail information of Glyur000026s00001919 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G62250.1 | 4.00E-89 | |
| NR | KHN03489.1 | 1.35E-176 | hypothetical protein glysoja_004515 [Glycine soja] |
| trEMBL | tr|I1MR44|I1MR44_SOYBN | 5.00E-177 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA17G01560.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00026 | 374920 | 392866 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.120 |
| SRR1783600 | control | 0.106 |
| SRR1783602 | moderate drought stress | 0.163 |
| SRR1811619 | moderate drought stress | 0.152 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.275 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.258 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.668 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.646 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.215 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.170 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 7.763 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.740 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.422 |
| SRR2868004 | Drought Stress (root) | 0.687 |
| SRR2967015 | Control (root) | 0.541 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 7.432 |
| SRR9715740 | Leaf | 12.874 |
| SRR9715741 | Leaf | 7.222 |
| SRR9715739 | Root | 0.067 |
| SRR9715742 | Root | 0.107 |
| SRR9715743 | Root | 0.062 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.406 |
| SRR8749028 | MeJA induced 9h | 0.356 |
| SRR8749029 | MeJA induced 9h | 0.426 |
| SRR8749030 | Uninduced | 0.649 |
| SRR8749031 | Uninduced | 0.769 |
| SRR8749032 | Uninduced | 0.435 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.539 |
| SRR8400027 | Control - Root | 0.577 |