Gene detail information of Glyur000026s00001891 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G11700.1 | 3.00E-37 | Protein of unknown function, DUF584 |
| NR | XP_004507692.1 | 4.85E-95 | PREDICTED: uncharacterized protein LOC101501221 [Cicer arietinum] |
| trEMBL | tr|V7CAI8|V7CAI8_PHAVU | 3.00E-92 | Uncharacterized protein {ECO:0000313|EMBL:ESW25936.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00026 | 227286 | 227876 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000026s00001891.1 | PF04520.8 | Senescence_reg | 29 | 195 | 1.70E-41 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.256 |
| SRR1783600 | control | 4.730 |
| SRR1783602 | moderate drought stress | 5.272 |
| SRR1811619 | moderate drought stress | 4.828 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.901 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.634 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 34.081 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 34.856 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 123.909 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 121.907 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 20.177 |
| SRR2868004 | Drought Stress (root) | 50.103 |
| SRR2967015 | Control (root) | 24.958 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 49.332 |
| SRR9715740 | Leaf | 62.992 |
| SRR9715741 | Leaf | 38.023 |
| SRR9715739 | Root | 97.896 |
| SRR9715742 | Root | 48.468 |
| SRR9715743 | Root | 51.928 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 25.856 |
| SRR8749028 | MeJA induced 9h | 23.656 |
| SRR8749029 | MeJA induced 9h | 21.356 |
| SRR8749030 | Uninduced | 0.776 |
| SRR8749031 | Uninduced | 0.268 |
| SRR8749032 | Uninduced | 8.962 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 20.440 |
| SRR8400027 | Control - Root | 37.769 |