Gene detail information of Glyur000026s00001878 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G21780.1 | 5.00E-12 | |
| NR | NP_001235725.1 | 2.25E-57 | uncharacterized protein LOC100500278 [Glycine max] |
| trEMBL | tr|K7MJG3|K7MJG3_SOYBN | 4.00E-58 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA17G01840.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00026 | 150257 | 150601 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.266 |
| SRR1783600 | control | 6.348 |
| SRR1783602 | moderate drought stress | 8.131 |
| SRR1811619 | moderate drought stress | 8.484 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 72.138 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 73.016 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 15.184 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 15.165 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.825 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.770 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 29.826 |
| SRR2868004 | Drought Stress (root) | 17.380 |
| SRR2967015 | Control (root) | 23.321 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.457 |
| SRR9715740 | Leaf | 1.055 |
| SRR9715741 | Leaf | 0.091 |
| SRR9715739 | Root | 8.082 |
| SRR9715742 | Root | 1.964 |
| SRR9715743 | Root | 4.821 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.074 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.066 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 34.977 |
| SRR8400027 | Control - Root | 66.940 |