Gene detail information of Glyur000026s00001859 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G19190.1 | 2.00E-11 | |
| NR | XP_007147751.1 | 6.38E-58 | hypothetical protein PHAVU_006G151900g [Phaseolus vulgaris] |
| trEMBL | tr|V7BRS2|V7BRS2_PHAVU | 2.00E-58 | Uncharacterized protein {ECO:0000313|EMBL:ESW19745.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00026 | 62005 | 63192 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 39.928 |
| SRR1783600 | control | 38.743 |
| SRR1783602 | moderate drought stress | 69.727 |
| SRR1811619 | moderate drought stress | 67.200 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 61.867 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 60.224 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 15.864 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 14.795 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 31.647 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 31.745 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 58.419 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 58.843 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.288 |
| SRR2868004 | Drought Stress (root) | 8.919 |
| SRR2967015 | Control (root) | 12.003 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 45.980 |
| SRR9715740 | Leaf | 115.836 |
| SRR9715741 | Leaf | 36.916 |
| SRR9715739 | Root | 2.870 |
| SRR9715742 | Root | 4.921 |
| SRR9715743 | Root | 5.421 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.063 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.143 |
| SRR8749032 | Uninduced | 0.002 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 6.766 |
| SRR8400027 | Control - Root | 23.258 |