Gene detail

Gene detail information of Glyur000026s00001851

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G59730.2	8.00E-141	exocyst subunit exo70 family protein H7
NR	XP_004505905.1	0	PREDICTED: uncharacterized protein LOC101512865 [Cicer arietinum]
COG	NP_297411.1	5.00E-08	asparagine synthetase B [Xylella fastidiosa 9a5c]
Swissprot	tr\|Q9LZD3\|E70A1_ARATH	2.00E-78	Exocyst complex component EXO70A1
trEMBL	tr\|I1LK82\|I1LK82_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA11G15420.1}

Sequence

Transcript Sequence

>Glyur000026s00001851.1
ATGAGAAGCATTTTCTTCAAACCATCATCACCTTCTCCTCCTCCATCCACGTCACTCTCTCCTCTCCGAACCTTCTCAGACAACTTAATGGATGAAAACATCGAAACCGCAGAATCACTCATAACCAAATGGGATTATTCCAACACCAACCAATCCAGAATCCCCAACCCTCTTTTCAGCGGCACCCGCAAGGAAGCCAAACAGTACCTAAACGCGGTGAAGGGACTACAATCCGCTATGCAGTACCTGGTCACACGTGATTCCACCTCCAACACGCTCGTGCGAGCACAGTTCTTGATGCAACTCGCNATGAAGACTCTACAGAAGGAGTTCCACCAGATACTGTCCTCAAACAGGGACCACTTGGACCCTGAAACCGTCTCCACGCGTTCCTCCACCGACTGCAGAAGCAGCGTTTCCGATTACGACGACGAAATCTCCGAGGAGGACGAGTTTCGCGTCGCCGGAAACACAATCTCCGAGACGGAGAGGGTTTCCATGCTAGCCATGGCGGATTTGAAGGCAATTGCGGATTGCATGATTTCCTCCGGCTACGGCAAAGAGTGCGTCAAGGTTTACAACATCGTGAGGAAATCGATCGTCGATGAGGCATTGTACCATCTCGGAGTCGAACGCTTGAGCTTCTCTCAGGTCCAGAAGATGGATTGGGAGGTTCTCGAGTTGAAGATCAAGACCTGGTTGAACGCCGTCAAAGTCGCCGTCGGTACTCTGTTCCATGGCGAGAGGATCCTCTGCGATCANGTCTTCGCTGCGGCCTCGGGGAAGAGAATCGCCGAGTCCTGTTTCGCGGAGATCACCAGAGAAGGCGCAGCGTCGCTGTTTGGATTCCCGGAAATGGTGGGAAAATGCAAGAAAACGCCGGAGAAAATGTTCAGGACTCTTGATTTGTACGAAGCCATCTTTGACCACTGGCCACAAATCGAGTCCATCTTCTCGTTCGAATCAACCTCCAGCGTCCGTACACAGGCCGTTGCGTCGTTGGTGAGGCTCGGCGAGGCCGTTAGGACGATGCTAACGGACTTCGAATCGGCGATTCAGAAGGACTCTTCCAAGACACGTGTCCCTGGCGGTGGCGTCCACCCGCTCACGCGCTATGTCATTAACTACATCACCTTCCTCGCCGATTACAGCGGCGTGCTCGCCGACATCGTCGCCGATTTGCCGCAATCTCCGTTGCCGGAGAATTACTATCGCAGCCCCATGCGCGATGAAAGCCCTTCGTCTTCGGAGATATCGGAGAGGATCGCGTGGCTTATACTAGTCTTGCTCTGCAAGCTTGACGGTAAAGCGGAGCTCTACAAGGACGTGGCTCTTTCTTATCTGTTCCTCGCCAATAACTTGCAATACGTCGTCGTAAAGGTTCGAACATCGAACCTAGGGTTCCTCCTNGGCGGGGATTGGTTTGCGAACCATGAATTGAAGGTTGCAGAGTACGTGTCCAAGTACGAGCGCGTTGGGTGGCGCAGAGTAATGTCGGCGTTGCCGGAGAATCCCATGGCGGAGAAGGTCAGGGCATGCTTCGTGGGCTTCGAGGCCGCGTTACGTGAAGAGTGCAGGAAACAGTCCTCGTGGATCGTATCCGACCCGAAACTGCGAGACGAAATCAAAGCCTCGATAGCTTCGAAGCTGGTGCAACGGTACAGGGAATTATACGAGAAGCATCGGGTCGGGTCGGANCCAGGTATAAGGCTTTTACCCGATGATGTAGGGAATTACCTGTCTGGCATTTTGTATGGGATTGGAGATTCGGGTAGCGTGTCGTCACATTCTTCGTCGACGTCGTCGTCTTCTCGTCGCTCTAATCGTCGATCGTTTGCTGTGAAGGATGAGATATTCTGCATGTTTGAGGGAGCTCTTGACAATTTGGGCAGCTTGAGACAACAATACGGACTGGCCAAGTCCGCCAATGAAGTACTCTTGGTCATCGAGGCTTACAAAGCTCTACGTGACAGAGCACCCTACCCTCCCAATCACGTTGTTGGCCATCTCAGTGGGAGCTTCGCTTTCATTGTCTTTGACAAATCCACTTCTACCCTCTTTGTGGCCTCCGACCAATTTGGCAAGGTACCTCTTTTTTGGGGAATAACTGCTGATGGATACGTAGCATTTGCTGATGACGCAGAATTGCTTANAGGTGCTTGTGGCAAGTCACTTGCTTCTTTCCCTCAAGGGTGTTTCTACTCAACAGCTGTTGGAGGATTGATGTGCTATGAGAATCCTAAAAATAAGATTACTGCAGTACCTGCTAATGAAGAGGAAATCTGGGGTGCCACCTTCAAGGTGGAAGGGCCTGCAGTTGTGGCAGCCAGAGAGTAGACCTTTTTATGAATGAATGAATGAATGGATGCCTTATGGTGCGTGAGTGGAGCAATGGGGTTTATGTGGTTGTGACCATGATGAGGGGAACTGGGGTTAAGCAAAGTAGTAGGAGGGGGTGTAACCTTGTTCATTAGATAGAGAATTTACTGTTTCTATCTATGTACAGTTACGCTTTTTCAATCTAATAAGTTCTGGTTGTGGATTATCTACCGTGTTTCTATGTCAAATTTCCCAAGTCAAGTCAAGTCTTAGTTTTTTGTTTATTTTAGTTGAATCTTATGTAAAATTTAACCCTGTTAATGTTTATCACGTTCTTTCATTTATGTTGGGTCTTAGGTATGTATTTCAAAAGTTTTTAAAGAGAATAATTAATTTCACATTATCTAGGCGAGGATTAATAAACGGGTCAAAAAAAGGTGAGGAGTAATAAAGTTTATCAAGAATTGGTCTTCTGAAAACAGGAGAAGAAGCCGATATACGACTTTTTGCACAATCCAAGAACTAAACCGTTTTACGATTAGAAAGAGTCAGAATTGAGAAGGTGCCTGTCTTTCTTGGGCTGGGATTTTTGGGTCAATTCTTGGGCCTGGTGGAAGAAGAATCCCTGAAAGGAAGAGTGAGGGAGAGCTAGTTAGATGGGTAGTTGAGAGCTGATTAGGTTTGTCAGAGCATAGCATGGGGTTTAATGTGCATTGGGTAACTATAGTATATCTGTTCAGGGCCTATGTATTCAGGGTCCCTTCTGTGTATTTGCTGGGCTTGACCCTTTATCTATCTCATTCACACTTTGACCA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00026	30908	35194	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006887 exocytosis

cellular_component
GO:0000145 exocyst

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000026s00001851.1	PF03081.10	Exo70	230	581	3.50E-87
Glyur000026s00001851.1	PF12481.3	DUF3700	600	768	7.20E-77

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	70.194
SRR1783600	control	68.553
SRR1783602	moderate drought stress	125.608
SRR1811619	moderate drought stress	122.194

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	140.815
DRR006520	Root Summer glycyrrhizin high producing strain	131.472
DRR006521	Root Winter glycyrrhizin high producing strain	140.242
DRR006522	Root Winter glycyrrhizin high producing strain	126.219
DRR006523	Root Summer glycyrrhizin low producing strain	571.710
DRR006524	Root Summer glycyrrhizin low producing strain	535.557
DRR006525	Leaf Summer glycyrrhizin high producing strain	17.624
DRR006526	Leaf Summer glycyrrhizin high producing strain	16.130

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	47.197
SRR2868004	Drought Stress (root)	100.346
SRR2967015	Control (root)	135.347

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	115.431
SRR9715740	Leaf	86.710
SRR9715741	Leaf	200.027
SRR9715739	Root	258.284
SRR9715742	Root	245.265
SRR9715743	Root	249.404

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	191.517
SRR8749028	MeJA induced 9h	278.774
SRR8749029	MeJA induced 9h	333.829
SRR8749030	Uninduced	258.379
SRR8749031	Uninduced	220.062
SRR8749032	Uninduced	230.060

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	89.526
SRR8400027	Control - Root	96.733