Gene detail information of Glyur000025s00003369 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_002513686.1 | 1.31E-19 | conserved hypothetical protein [Ricinus communis] |
| trEMBL | tr|B9RIW7|B9RIW7_RICCO | 5.00E-20 | Putative uncharacterized protein {ECO:0000313|EMBL:EEF49089.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00025 | 484955 | 485511 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.745 |
| SRR1783600 | control | 3.357 |
| SRR1783602 | moderate drought stress | 2.989 |
| SRR1811619 | moderate drought stress | 3.249 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 12.549 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 11.451 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 9.800 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 10.572 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 9.138 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 10.403 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.490 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.296 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 13.095 |
| SRR2868004 | Drought Stress (root) | 11.875 |
| SRR2967015 | Control (root) | 12.712 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 9.229 |
| SRR9715740 | Leaf | 11.257 |
| SRR9715741 | Leaf | 9.297 |
| SRR9715739 | Root | 0.857 |
| SRR9715742 | Root | 4.772 |
| SRR9715743 | Root | 4.167 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 4.670 |
| SRR8749028 | MeJA induced 9h | 2.254 |
| SRR8749029 | MeJA induced 9h | 2.805 |
| SRR8749030 | Uninduced | 5.829 |
| SRR8749031 | Uninduced | 5.998 |
| SRR8749032 | Uninduced | 4.116 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 15.015 |
| SRR8400027 | Control - Root | 17.254 |