Gene detail information of Glyur000025s00003363 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G52420.1 | 9.00E-61 | |
| NR | XP_003556115.1 | 1.32E-142 | PREDICTED: uncharacterized protein LOC100797452 [Glycine max] |
| trEMBL | tr|I1NGW2|I1NGW2_SOYBN | 5.00E-143 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA20G30070.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00025 | 463553 | 464326 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.283 |
| SRR1783600 | control | 0.309 |
| SRR1783602 | moderate drought stress | 0.355 |
| SRR1811619 | moderate drought stress | 0.400 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.135 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.174 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.546 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.422 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.159 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.286 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 60.809 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 62.299 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.795 |
| SRR2868004 | Drought Stress (root) | 5.945 |
| SRR2967015 | Control (root) | 4.810 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 76.999 |
| SRR9715740 | Leaf | 97.167 |
| SRR9715741 | Leaf | 54.896 |
| SRR9715739 | Root | 0.310 |
| SRR9715742 | Root | 1.008 |
| SRR9715743 | Root | 0.578 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.901 |
| SRR8749028 | MeJA induced 9h | 2.665 |
| SRR8749029 | MeJA induced 9h | 1.368 |
| SRR8749030 | Uninduced | 1.813 |
| SRR8749031 | Uninduced | 1.013 |
| SRR8749032 | Uninduced | 1.774 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 6.010 |
| SRR8400027 | Control - Root | 3.099 |