Gene detail information of Glyur000025s00003350 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_004496532.1 | 5.42E-82 | PREDICTED: uncharacterized protein LOC101514128 [Cicer arietinum] |
| trEMBL | tr|I1NGX3|I1NGX3_SOYBN | 1.00E-76 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA20G30160.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00025 | 396843 | 397846 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.543 |
| SRR1783600 | control | 2.509 |
| SRR1783602 | moderate drought stress | 1.944 |
| SRR1811619 | moderate drought stress | 1.852 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.911 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.918 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.449 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.188 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.764 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.996 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.084 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.309 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 18.340 |
| SRR2868004 | Drought Stress (root) | 7.728 |
| SRR2967015 | Control (root) | 7.947 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.740 |
| SRR9715740 | Leaf | 3.503 |
| SRR9715741 | Leaf | 2.113 |
| SRR9715739 | Root | 0.394 |
| SRR9715742 | Root | 1.057 |
| SRR9715743 | Root | 1.366 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 15.179 |
| SRR8749028 | MeJA induced 9h | 6.896 |
| SRR8749029 | MeJA induced 9h | 4.916 |
| SRR8749030 | Uninduced | 1.146 |
| SRR8749031 | Uninduced | 0.893 |
| SRR8749032 | Uninduced | 1.353 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 11.087 |
| SRR8400027 | Control - Root | 9.254 |