Gene detail information of Glyur000025s00003339 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_006589525.1 | 1.42E-135 | PREDICTED: uncharacterized protein LOC102659389 [Glycine max] |
| trEMBL | tr|K7LKZ9|K7LKZ9_SOYBN | 4.00E-134 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA10G37525.1} (Fragment) |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00025 | 346189 | 347489 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.559 |
| SRR1783600 | control | 0.577 |
| SRR1783602 | moderate drought stress | 0.508 |
| SRR1811619 | moderate drought stress | 0.550 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.316 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.998 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 23.672 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 26.732 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.288 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.281 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 9.721 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 9.275 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.807 |
| SRR2868004 | Drought Stress (root) | 2.746 |
| SRR2967015 | Control (root) | 1.780 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.550 |
| SRR9715740 | Leaf | 0.937 |
| SRR9715741 | Leaf | 7.213 |
| SRR9715739 | Root | 0.136 |
| SRR9715742 | Root | 1.366 |
| SRR9715743 | Root | 1.026 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 4.444 |
| SRR8749028 | MeJA induced 9h | 2.880 |
| SRR8749029 | MeJA induced 9h | 4.390 |
| SRR8749030 | Uninduced | 0.687 |
| SRR8749031 | Uninduced | 2.955 |
| SRR8749032 | Uninduced | 2.048 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.403 |
| SRR8400027 | Control - Root | 0.581 |