Gene detail information of Glyur000025s00003337 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G52740.1 | 2.00E-09 | Copper transport protein family |
| NR | XP_003592191.1 | 4.92E-25 | hypothetical protein MTR_1g099800 [Medicago truncatula] |
| trEMBL | tr|G7IDY9|G7IDY9_MEDTR | 2.00E-25 | Uncharacterized protein {ECO:0000313|EMBL:AFK37756.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00025 | 332493 | 336891 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000025s00003337.2 | PF00403.21 | HMA | 1 | 39 | 4.90E-07 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.227 |
| SRR1783600 | control | 4.026 |
| SRR1783602 | moderate drought stress | 5.641 |
| SRR1811619 | moderate drought stress | 5.404 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 26.035 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 27.766 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 21.348 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 21.531 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 42.471 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 43.348 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 58.526 |
| SRR2868004 | Drought Stress (root) | 66.966 |
| SRR2967015 | Control (root) | 104.711 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 100.624 |
| SRR9715740 | Leaf | 103.721 |
| SRR9715741 | Leaf | 104.391 |
| SRR9715739 | Root | 10.708 |
| SRR9715742 | Root | 71.654 |
| SRR9715743 | Root | 62.412 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 17.257 |
| SRR8749028 | MeJA induced 9h | 21.400 |
| SRR8749029 | MeJA induced 9h | 16.740 |
| SRR8749030 | Uninduced | 86.600 |
| SRR8749031 | Uninduced | 30.104 |
| SRR8749032 | Uninduced | 14.448 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 23.799 |
| SRR8400027 | Control - Root | 64.901 |