Gene detail information of Glyur000025s00003336 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G64700.1 | 1.00E-31 | |
| NR | XP_003556129.1 | 5.04E-98 | PREDICTED: uncharacterized protein LOC100804894 [Glycine max] |
| trEMBL | tr|I1NGY4|I1NGY4_SOYBN | 2.00E-98 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA20G30270.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00025 | 326734 | 327465 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000025s00003336.1 | PF14009.1 | DUF4228 | 1 | 77 | 6.70E-13 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.295 |
| SRR1783600 | control | 4.550 |
| SRR1783602 | moderate drought stress | 2.355 |
| SRR1811619 | moderate drought stress | 2.424 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.473 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.409 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.066 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.149 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.981 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.864 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.403 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.784 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 8.823 |
| SRR2868004 | Drought Stress (root) | 5.262 |
| SRR2967015 | Control (root) | 7.156 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.186 |
| SRR9715740 | Leaf | 0.166 |
| SRR9715741 | Leaf | 0.391 |
| SRR9715739 | Root | 2.523 |
| SRR9715742 | Root | 2.091 |
| SRR9715743 | Root | 2.636 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.035 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.120 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 10.861 |
| SRR8400027 | Control - Root | 10.184 |