Gene detail information of Glyur000025s00003326 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G52880.1 | 2.00E-26 | F-box family protein |
| NR | KHN21800.1 | 2.99E-56 | F-box protein [Glycine soja] |
| Swissprot | tr|Q9FLX3|FB293_ARATH | 2.00E-31 | F-box protein At5g52880 |
| trEMBL | tr|I1LDK5|I1LDK5_SOYBN | 1.00E-56 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA10G37390.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00025 | 271351 | 273337 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.889 |
| SRR1783600 | control | 3.359 |
| SRR1783602 | moderate drought stress | 4.015 |
| SRR1811619 | moderate drought stress | 4.499 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.425 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.493 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 10.211 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 7.469 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.206 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.744 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.752 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.384 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.226 |
| SRR2868004 | Drought Stress (root) | 1.224 |
| SRR2967015 | Control (root) | 1.041 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.012 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.031 |
| SRR9715743 | Root | 0.058 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.098 |
| SRR8749028 | MeJA induced 9h | 0.225 |
| SRR8749029 | MeJA induced 9h | 0.121 |
| SRR8749030 | Uninduced | 0.190 |
| SRR8749031 | Uninduced | 0.168 |
| SRR8749032 | Uninduced | 0.704 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.053 |
| SRR8400027 | Control - Root | 0.015 |