Gene detail

Gene detail information of Glyur000025s00003306

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT3G59140.1	0	multidrug resistance-associated protein 14
NR	XP_004496497.1	0	PREDICTED: ABC transporter C family member 10-like [Cicer arietinum]
COG	NP_969385.1	2.00E-162	multidrug ABC transporter permease/ATPase [Bdellovibrio bacteriovorus HD100]
Swissprot	tr\|Q9LYS2\|AB10C_ARATH	0	ABC transporter C family member 10
trEMBL	tr\|I1LDI8\|I1LDI8_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA10G37160.1}

Sequence

Transcript Sequence

>Glyur000025s00003306.1
ATTTTTCTTTTCCAAATTAACTTCTCTTTTAAGTAAGAATCTGGACTGTAACTAGTAAGAAAAAATTATTCATATTCTCACATGTTTTCTTGTTGATAAGCAAAGATTCTAAGGCATGATTTATTTGCCCNTTGTGTTTTTCTACAGAGTGTGAGCAGCAAAAGAGAAGATAAAGAAAATGGTGGGTTTTTGGAGTGTGTTTTGTGGGGAATCTGGTTGTTCAGAGGCTGGAAGAAAGCCTTGCAGTTATGATTTTAAGCTTCTCATTGATCCNTCCGCATGTATCAACCATTTGTTGATCTCTTGTTTTGATGTGTTGCTGCTCATCATGCTCCTATTTATAATGATCCAGAAGTCATCATTAAAAGGTCCATTTCAGGGTCATATTCGTGGGCAAAGATATTCAAATTTGCAGCTAGTTTCTGCCATAGCCAATGGTGCTCTTGGGTTGGTACATTTGTTCTTAGGCATTTGGATTTTNGAGGAGAATTTGAGGAAAACCCAAACTGCATTGCCTCTTGACTTGTGGTTGCTGGAATTCTTTCAGGGATTAACATGGTTGTTAGTGGGTTTAACATTGAGTCTTAAGTTGAAGCAACTTCCAAGAACATGGTTAAGGCTTTCTTCTATTCTAATCTTCTTGGTTTCTGGCATTTTCTGTGCTTTATCCTTGTTTTATGCAATCAGTAGTGGAGAACTGTCCCTCAAGGTAGCATTAGATGTTCTATCTTTTTCAGGGGCAATATTATTGGTATTATGCACTTACAAGGAATCTAGGCGTAGGGAGACTGACAGAGAAATTGATGAAAGCCTTTACACCCCTTTAAATGGTGAGTCCAATAAAAATGATTCTGTTATCCAAGTGACCCGTTTTGCTAAAGCTGGATTCTTCAGTAGGATGTCATTTTGGTGGCTAAATGCATTGATGAAGAGAGGTAAAGAGAAAACACTTAATGATAAAGATGTCCCAAAGTTGCGGGAGGAAGATAGAGCAGAAAGTTGCTATTCACTGTTTCTAGACCGATTGAGCAAGCAGAAACAGAAGGATCCATCCTCACAACCATCGGTTTTGAGGACACTAATTTTATGCCACCGGAGAGAAATTTTGATATCTGGATTCTTTGCATTGCTCAAGGTACTTGCTCTGTCTTCTGGACCTCTGCTTCTGAATTCCTTTATATTGGTTGCTGAGGGTTATGAGAGTTTCAAATATGAAGGTTTTGTATTGGCCATATCACTTTTCTTTACAAAAATCATAGAATCCCTTTCACAAAGGCAGTGGTACTTTCGCTCCAGACTCATTGGTCTGAAAGTTAGGTCACTGCTAACNGCAGCCATTTATAGAAAGCAACTGAGGCTATCCAATTCTGCTAGATTGATGCACTCCGGTGGTGAGATAATGAATTATGTGACTGTGGATGCTTATAGAATTGGAGAATTTCCCTATTGGTTTCACCAAACATGGACAACTAGCTTCCAGCTATGTATCTCATTAGTAATACTTTTCCGTGCTGTTGGACTTGCTACAATTGCTTCCTTGGTGGTGATACTTATCACAGTGCTTTGCAATACCCCACTTGCAAAGTTACAGCACAAATTTCAGAGCAAACTTATGGTGGCACAAGATGAAAGATTGAAGGCTACTTCTGAAGCTCTTGTGAATATGAAGGTGTTGAAGTTGTATGCGTGGGAAACCAACTTCAAAAATGCCATAGAAGGATTAAGAAATGTGGAGCTCAAATGGTTGTCTGCAGTGCAATTGAGAAAGGCATACAACACCTTTCTCTTTTGGTCCTCACCTGTTTTGGTGTCTGCAGCTTCCTTCGGGGCGTGTTACTTTCTTAATGTACCCTTGCATGCAAATAATGTTTTNACTTTTGTGGCAACCTTACGCCTTGTTCAAGATCCAATTAGAACCATCCCTGATGTTATTGGGGTGGTGATTCAGGCAAAAGTTGCATTCACCCGGATTTTAAAATTCCTGGAGGCACCTGAATTGCAGAATGCAAATGTCAGGAAGAGGTTTTCTAATGACAATATGAGGGGCTCAATCTCAATCAAGTCTGCTAACTTTTCTTGGGAAGACAGTGATGTAACAAAGCCAACACTGAGGAACATAAATTTGGAGGTTAGACCCGGACAAAAGGTAGCTATTTGTGGAGAGGTTGGCTCAGGCAAATCAACTCTCTTGGCTGCAATCCTCAGAGAAGTTCCTAATACTCAAGGAACAATTGATGTTTATGGGAAGTTTGCCTATGTTTCCCAAACAGCGTGGATACAGACAGGTACAATAAGGGAAAATATATTGTTTGGTTCAGCTATGGATGCTCAAAAATATGAGGAAACTCTTCATAGGTCTTCACTTTTGAAAGACCTTGAGTTGTTTCCCCATGGTGATCTCACTGANATAGGAGAGAGAGGGGTTAACCTGAGTGGAGGTCAGAAACAGCGTATTCAACTTGCTCGTGCTCTGTATCAAAATGCTGATATCTATCTCTTGGATGATCCATTCAGTGCTGTTGATGCACAAACTGCCACAAATTTGTTTAATGAATACATTGTGGAAGGACTTGCTGGGAAAACAGTCTTGCTTGTGACTCATCAAGTTGACTTCCTTCCAGCATTTGATTCTGTTTTGTTGATGTCAGATGGGGAAATCCTACATGATGCTCCTTATCACCATTTGTTGAGCACAAGCCAAGAATTTCAGGACCTTGTGAATGCTCACAAAGAGACTGCTGGTTCTGATCGGCTTGTGGATGTTACTTCATGTCAAAGACATTCAAGTTCTGCTAGAGAGATTAAAAAAACATATGGGGAGAAAGAGAAGCAATTTGAAGAATCAAAAGGAGATCAATTGATTAAGCAAGAAGAGAGAGAGATTGGAGACCAAGGGTTCAAGCCTTACTTACAGTATCTGAATCAGAACAAAGGATATGTATACTTCTCTGTGGCTTCTCTTTCTCACCTCGTCTTTGTGATTGGCCAGATATTGCAAAACTCATGGATGGCTGCTAATGTTGACAATCCTCAAGTCAGCACTTTGAGATTGATTCTGGTTTACTTGTTGATTGGAGTTACTTCAACATTGTTCCTATTGATGAGGAGTCTTTTAANAGTTGCTTTGGGCCTTCAATCTTCAAAGTCTTTATTTGTACAGCTATTGAACACCCTTTTTCGTGCACCTATGTCATTTTATGACTCCACACCTTTGGGACGGATACTTAGTAGGGTCTCCTCTGATCTCAGCATTGTTGATCTTGATGTCCCTTTTGGCCTTCTTTTTGCTGTGGTAGCCACGACAAATTGTTATGCTAATCTTACAGTTTTAGCAGTGGTTACTTGGCAAGTCTTATTTGTCTCCATACCAATGATTTATCTTGCACTGCGCTTGCAGAAATATTACTTTGCCTCAGCAAAAGAACTGATGCGGATGAATGGCACAACAAAATCCTTTGTAGCTAACCATCTTGCTGAATCTGTTGCTGGAGCTGTGACTATAAGGGCTTTTGAGGAGGAAGATCGTTTTTTTGTCAAGAATCTTGATCTAATTGACATCAATGCTACTCCTTTTTTCCATAGTTTTGCTGCAAATGAGTGGTTGATTCAACGGTTAGAAACGGTTAGTGCAGTTGTCCTTGCATCTGCGGCACTTTGCATGGTCATACTTCCACCTGGGACATTCTCCTCTGGATTTATTGGCATGGCTCTCTCTTATGCCCTTTCACTTAACGCTTCCTTAGTATTCTCAATTCAACATCAATGCAACATAGCAAATTATATAATATCAGTGGAGAGGCTAAACCAATATATGCATGTACCAAGTGAGGCCCCGGAAGTCATAGAAGGAAACCGTCCTCCTGTGAATTGGCCAGTTGCTGGTAGAGTAGAAATAAATGAATTGCAGATACGATACAGGCCTGATGCACCGCTAGTACTCCGTGGGATCACATGCACATTTGAAGGAGGGCACAAAATCGGTATNGTTGGCCGGACAGGCAGTGGCAAGTCCACTCTGATCGGTGCTTTATTTCGTCTAGTGGAGCCAGCAGGTGGAAAAATCATTGTTGATGGCATTGACATTTGTTCCATTGGACTTCATGATTTGAGGTCACGTTTTGGTATTATACCTCAGGACCCTACCCTTTTCAATGGGACAGTCAGATACAATTTGGACCCCTTATCTCAACACTCTGATCAAGAGATATGGGAGGTTCTTGGGAAGTGTCAGTTGCAAGNGGCTGTCCAAGAGAAAGAAGGGGGACTAGACTCCTCAGTTGTTGAAGATGGGGCAAACTGGAGCATGGGACAACGGCANTTATTCTGTTTGGGGCGCGCTCTTCTAAGGAGAAGTCGGATATTGGTGCTGGATGAAGCAACTGCATCAATTGATAATGCAACTGATTTGATTCTGCAGAAAACCATTAGGACCGAGTTTGCGGACTGCACGGTAATCACGGTTGCTCACAGGATACCAACTGTGATGGATTGCACTAAGGTTCTTGCCATCAGTGATGGAAAACTGGTAGAGTATGATGAGCCAATGAACTTGATGAAGAGAGAAGGATCTTTATTCGGGAAGCTTGTCAAAGAATACTGGTCTCATTTTCAGTCTGCAGAGTCTCATTAAAGCTGAAAATGTTTTTTTGGCATAGCCTTTTTATTTCTTTCTGTAGAATTGGCAAGAAGCCAAGAAAATGTAAATAGAAATAGGATGTAAGAGATGCATTATTAAATTTGGACAAACTCTGAGACCTCANAAGTAGGAAAGGAATTAGAGGGACTTAGAAGAAAATATTGCAAAGGGATTCAAATGATGTACCATTTCTAGGATGAGGTATGGGCTGTTTCACTCTGGAAAGCCTGCATTATTTACCAATAAATGTGTATGATTGCACAACTTTTGGATGGACACTTAATAACATTGTATAAATGTGGCAGT

Protein Sequence

>Glyur000025s00003306.1
MVGFWSVFCGESGCSEAGRKPCSYDFKLLIDPSACINHLLISCFDVLLLIMLLFIMIQKSSLKGPFQGHIRGQRYSNLQLVSAIANGALGLVHLFLGIWIXEENLRKTQTALPLDLWLLEFFQGLTWLLVGLTLSLKLKQLPRTWLRLSSILIFLVSGIFCALSLFYAISSGELSLKVALDVLSFSGAILLVLCTYKESRRRETDREIDESLYTPLNGESNKNDSVIQVTRFAKAGFFSRMSFWWLNALMKRGKEKTLNDKDVPKLREEDRAESCYSLFLDRLSKQKQKDPSSQPSVLRTLILCHRREILISGFFALLKVLALSSGPLLLNSFILVAEGYESFKYEGFVLAISLFFTKIIESLSQRQWYFRSRLIGLKVRSLLTAAIYRKQLRLSNSARLMHSGGEIMNYVTVDAYRIGEFPYWFHQTWTTSFQLCISLVILFRAVGLATIASLVVILITVLCNTPLAKLQHKFQSKLMVAQDERLKATSEALVNMKVLKLYAWETNFKNAIEGLRNVELKWLSAVQLRKAYNTFLFWSSPVLVSAASFGACYFLNVPLHANNVXTFVATLRLVQDPIRTIPDVIGVVIQAKVAFTRILKFLEAPELQNANVRKRFSNDNMRGSISIKSANFSWEDSDVTKPTLRNINLEVRPGQKVAICGEVGSGKSTLLAAILREVPNTQGTIDVYGKFAYVSQTAWIQTGTIRENILFGSAMDAQKYEETLHRSSLLKDLELFPHGDLTXIGERGVNLSGGQKQRIQLARALYQNADIYLLDDPFSAVDAQTATNLFNEYIVEGLAGKTVLLVTHQVDFLPAFDSVLLMSDGEILHDAPYHHLLSTSQEFQDLVNAHKETAGSDRLVDVTSCQRHSSSAREIKKTYGEKEKQFEESKGDQLIKQEEREIGDQGFKPYLQYLNQNKGYVYFSVASLSHLVFVIGQILQNSWMAANVDNPQVSTLRLILVYLLIGVTSTLFLLMRSLLXVALGLQSSKSLFVQLLNTLFRAPMSFYDSTPLGRILSRVSSDLSIVDLDVPFGLLFAVVATTNCYANLTVLAVVTWQVLFVSIPMIYLALRLQKYYFASAKELMRMNGTTKSFVANHLAESVAGAVTIRAFEEEDRFFVKNLDLIDINATPFFHSFAANEWLIQRLETVSAVVLASAALCMVILPPGTFSSGFIGMALSYALSLNASLVFSIQHQCNIANYIISVERLNQYMHVPSEAPEVIEGNRPPVNWPVAGRVEINELQIRYRPDAPLVLRGITCTFEGGHKIGXVGRTGSGKSTLIGALFRLVEPAGGKIIVDGIDICSIGLHDLRSRFGIIPQDPTLFNGTVRYNLDPLSQHSDQEIWEVLGKCQLQXAVQEKEGGLDSSVVEDGANWSMGQRXLFCLGRALLRRSRILVLDEATASIDNATDLILQKTIRTEFADCTVITVAHRIPTVMDCTKVLAISDGKLVEYDEPMNLMKREGSLFGKLVKEYWSHFQSAESH

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00025	157835	164335	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process

GO:0006810 transport

GO:0055085 transmembrane transport

cellular_component
GO:0016021 integral component of membrane

molecular_function

GO:0005524 ATP binding

GO:0016887 ATPase activity

GO:0042626 ATPase activity, coupled to transmembrane movement of substances

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000025s00003306.1	PF00664.18	ABC_membrane	309	571	1.10E-25
Glyur000025s00003306.1	PF00005.22	ABC_tran	644	778	2.60E-24
Glyur000025s00003306.1	PF00664.18	ABC_membrane	932	1187	5.80E-21
Glyur000025s00003306.1	PF00005.22	ABC_tran	1254	1402	8.10E-26

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	1.789
SRR1783600	control	1.775
SRR1783602	moderate drought stress	3.241
SRR1811619	moderate drought stress	3.338

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	1.429
DRR006520	Root Summer glycyrrhizin high producing strain	1.412
DRR006521	Root Winter glycyrrhizin high producing strain	6.934
DRR006522	Root Winter glycyrrhizin high producing strain	6.833
DRR006523	Root Summer glycyrrhizin low producing strain	1.966
DRR006524	Root Summer glycyrrhizin low producing strain	1.900
DRR006525	Leaf Summer glycyrrhizin high producing strain	12.319
DRR006526	Leaf Summer glycyrrhizin high producing strain	12.305

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	4.831
SRR2868004	Drought Stress (root)	22.486
SRR2967015	Control (root)	14.445

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	19.991
SRR9715740	Leaf	22.882
SRR9715741	Leaf	22.790
SRR9715739	Root	1.236
SRR9715742	Root	9.051
SRR9715743	Root	6.399

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	26.605
SRR8749028	MeJA induced 9h	39.109
SRR8749029	MeJA induced 9h	32.315
SRR8749030	Uninduced	23.524
SRR8749031	Uninduced	19.963
SRR8749032	Uninduced	23.272

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	17.205
SRR8400027	Control - Root	8.208